| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3847 |
|---|
| Symbol | |
|---|
| ID | 4280738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 4591486 |
|---|
| End bp | 4593678 |
|---|
| Gene Length | 2193 bp |
|---|
| Protein Length | 730 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638136668 |
|---|
| Product | glucosyltransferase MdoH |
|---|
| Protein accession | YP_752511 |
|---|
| Protein GI | 114564997 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2943] Membrane glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATGA TTCAGCCAGA TGCTGACATT AGCACTGTCG ACCCTACGTT GGTCGGTGGT
GCAGCCATGC CGCTAGAACG ACCAAGCCCA ATGGAAGCGC AAAGTTTACG TGCGTTGTCC
GATGGTATGC CACGCAAGAG CATTATCGCC GATGGCGTAA AGTCAGATGG ATTACGCCGT
CTGTTAGTGG TTGGCAGCGC TTCTATTATG TCGGTGATGG CTATATACGA GATGGTGTCG
GTATTTAATG TCGGTGGCGT AACGCCACTT GAATACATCG TTTTAGTGTT GTTTGCGGTT
AACTTTTGTT GGATAGCATT GGCATTTAGT GGCGGCATTG CCGGCTTTAT TATGCTACTT
AAAAAGCCTG CGATAGAAAC GGCCGAACGT ATAAAGCTGC ATACCCGCAC CGCGATATTA
ATGCCGACAT ATAACGAATC ACCCGATCGC GTTTTTGCTG CAGTTGAAGT GATGGCGATG
GCATTGGTTG CATCCGGCGA AAGCCATGCG TTTGACTGGT TTATATTAAG CGACACTACT
GACCCCGATA TTGCGTTGGC AGAAGAACAG GCATTTTTAA TATTGCGCCA TCAAGTGAGC
AAAGATGCGC GGGTGTATTA CCGCCGTCGA CGTAAAAATG ATGCCCGTAA AGCCGGTAAT
GTGGCCGATT TTTGCAAGCG TTGGGGCGCC CGATACGACC ATTTGTTGGT GCTAGACGCT
GACAGTTTAA TGGAAACCCA CACTATCCTC AGTCTCGCTC AGCGGATGCA GGCTGATCCC
GATGCTGGGC TTATCCAAAC CATTCCGTAT TTAATCAATG GCAACACCTT AATGGCGCGA
CTACAGCAAT TTGCTGCGCG AATTTATGGT CCGGTTATTG GTACTGGTTT ATCTTGGTGG
ACCCATAAAG AAGGTAACTT TTGGGGCCAC AATGCCATTA TCCGCACCCA AGCCTTTATG
AGCGCAGCAG GGTTACCCAA CCTTGCAGGT AGACCGCCAT TTGGTGGCCA TATTATGAGC
CACGACTTTG TCGAGGCTGC GCTCATTCGA CGTGCTGGTT GGAGCGTGGT CATTGCCGCA
GGCCTTCCAG GGTCTTATGA AGAATGCCCA CCGTCTATTG TCGATTTAGC GGTGCGCGAT
CGCCGTTGGT GCCAAGGTAA TTTACAACAC TCACGGGTGT TGTTTAGTAA AGGATTACAT
TGGGTTAGCC GCTTACATTT ACTCACTGGG ATAATGGCTT ATTTATCATC GCCATTTTGG
TTAATGCTGA TTTTGTCGGG CTTAATGCTG GCATTACAAG CACACTTTAT TCGCCCAGAG
TATTTTACCG ATCAATTCTC TTTGTTTCCC ACCTGGCCAG TAATGGACTC AGACCGTGCA
CTACGATTGT TTTATATCAC CATGGGCATA TTGTTTGGTC CTAAAATTCT TGGGATCATA
TTGTTACTGA AAAATAGCAT CATGAGTAAG CAATTAGGTG GCAGAGGTAA AGCCATGATT
AGCGTGGTAG TTGAAGTTAT ATTGTCGGCA CTGATTGCGC CAATAATGAT GCTTATCCAC
TGCGGTGCTG TGATGTCTAT TTTAGCTGGA CGCGACAGCG GTTGGGCGCC ACAACGCCGT
GATGACGGCA GCTTACCTTG GCTAACACTG ATTTATCGTC ATCGTTGGCA CATGTTAATT
GGTGCGTTAT TAGGTTACGC CGCAGTGCTT GATTCGCTTA CCTTATTGGC GTGGATGAGC
CCCGCGTTAA TTGGTTTATG GCTTGCTGTA CCGCTTTCTG CCATGACAAG CTCAGAGCGA
TTTGGTTTAT GGGTAAAAGG CTTAGGTATT TTGGCCACGC CAGAAGAAGT GAGCGCGCCG
CAACTTAGTG TAGACTCACA AGCGCGTCGT GCTGAATATG TGCAAGCCAT CGCTGAGCCG
TGGACCTTAT CAAGGCTACT GCAAGACCCT GCATTAATGG CGTTACATTT AGCCCTTATT
GACAAAAAGC CACATCGCTT GCCTGGTTCA GCGGTTGAAT CACTCGAAGC CATCACCCGA
GTTAAAGTGC AAGAAGCACA GTGCCAGCAC AACATTGTAA AGCTGTTTAC CCGTCAAGAA
TTGGCATATT TACTGGGTAA CCCTTTATTG CTAAAACAGT TACAAAAGCT GCCAGAGCAA
TATGTCACCG AAGGTATCGT GTCCTTCTGT TAG
|
|---|
| Protein sequence | MNMIQPDADI STVDPTLVGG AAMPLERPSP MEAQSLRALS DGMPRKSIIA DGVKSDGLRR
LLVVGSASIM SVMAIYEMVS VFNVGGVTPL EYIVLVLFAV NFCWIALAFS GGIAGFIMLL
KKPAIETAER IKLHTRTAIL MPTYNESPDR VFAAVEVMAM ALVASGESHA FDWFILSDTT
DPDIALAEEQ AFLILRHQVS KDARVYYRRR RKNDARKAGN VADFCKRWGA RYDHLLVLDA
DSLMETHTIL SLAQRMQADP DAGLIQTIPY LINGNTLMAR LQQFAARIYG PVIGTGLSWW
THKEGNFWGH NAIIRTQAFM SAAGLPNLAG RPPFGGHIMS HDFVEAALIR RAGWSVVIAA
GLPGSYEECP PSIVDLAVRD RRWCQGNLQH SRVLFSKGLH WVSRLHLLTG IMAYLSSPFW
LMLILSGLML ALQAHFIRPE YFTDQFSLFP TWPVMDSDRA LRLFYITMGI LFGPKILGII
LLLKNSIMSK QLGGRGKAMI SVVVEVILSA LIAPIMMLIH CGAVMSILAG RDSGWAPQRR
DDGSLPWLTL IYRHRWHMLI GALLGYAAVL DSLTLLAWMS PALIGLWLAV PLSAMTSSER
FGLWVKGLGI LATPEEVSAP QLSVDSQARR AEYVQAIAEP WTLSRLLQDP ALMALHLALI
DKKPHRLPGS AVESLEAITR VKVQEAQCQH NIVKLFTRQE LAYLLGNPLL LKQLQKLPEQ
YVTEGIVSFC
|
|---|
| |