| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3841 |
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| Symbol | |
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| ID | 4280732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4582173 |
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| End bp | 4583489 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136662 |
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| Product | anaerobic C4-dicarboxylate transporter |
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| Protein accession | YP_752505 |
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| Protein GI | 114564991 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
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| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTATA TACACATGCT GCTGTTATTA GCGGTGATAT TTGTTGGTAT TCGCCATGGC
GGTATCGCCT TTGGTTTATT GGGCGGGTTA GGTGTATCGG TACTCGCATT TGTATTTGGC
GTTGCACCAG GTGCGCCACC TATTAGTGTA ATGTTAATTA TTCTAGCCGT AGTGGCGGCT
TCGGCGACGT TAGAGGCCAC GGGCGGTTTA AAGCTGTTGG TAAAGTTTGC TGAAAAGCTG
TTGCGCAAAC ATCCTGAACA TATCGTCTTT TTAGGCCCAC TATGTACCTA TTCATTAACC
GTTCTGGTTG GTACGGGTCA TTCTGTTTAT CCCCTTCTTC CTGTAATTTA CGATGTGGCG
TACAAAAAAG GCATCCGCCC AGAACGTCCA TTAGCCATGG CAACTGTAGC ATCACAAATG
GGTATTACAG CCAGCCCAAT TGCCGCAGCA GCAGCAGTAG TGCTTGCCAC TGCCGTTGAT
AATAATCTAG ATATTAACTT ACTTGATGTA CTCATGGTGA CCATTCCCGC CACACTAACA
GGCTTACTAG TAGCGTGTAC TTGGAGCTTA AAGCGCGGTA AAGATTTAGA TAAAGATGAA
GAGTTTCAGG CACGTTTAAC AGATGATGAG TTTCGTGAAG CATTAACCGA CCCCAAAGCG
GATGAGGTGC AAACACCCCA GGCCGAATCG ACAGCAAAGA AAGGCTTAAC AGTATTTTTA
TTGGGTATAT TTGCCGTTAT CATGGTGGCG ATGTTTAGTA AGCAAATACT GCCTGCTGGC
GTCAGCATGT CGGTAGCGAT TCAATTTATG ATGCTATCAG TCGGTGGAGT AATATTACTC
GCCACCAATA TCTCACCGAA AAAAATTGTC ACCAGTAACG TGTTTACCGC CGGTATGACT
GCGGTCATTA TCATTTTTGG TATTGCATGG ATGAGTGACA CCATTATTGA GCACCATAAA
ACCTATTTAG TGAGTGCGGT AAGCGACATT GTCAGCGTGT ACCCATGGAC ATTTGCTATC
GCGATGTTTG TGTCGTCTAT CTTCTTAAAA AGCCAAGCAG CGGTATTAAC TATAATGCTG
CCATTGGGGT ATTCACTCGG CATCCCAGCT CCAGTATTAA TTGGTGTACT GCCAGCGTGT
TATGCCTATT TCTTCTTCCC ATTCTACCCA AGCGATTTAG CCGCAATTAG TTTTGATAGA
ACCGGCACCA CCCACATTGG TAAATACGTA CTCAACCACA GCTTTATTAT TCCAGGCTTT
ATTGGCGTAG TAACCGCTAC ATTTGTGGGT TACTTTATAT CGATGGCGAT TAACTAG
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| Protein sequence | MFYIHMLLLL AVIFVGIRHG GIAFGLLGGL GVSVLAFVFG VAPGAPPISV MLIILAVVAA
SATLEATGGL KLLVKFAEKL LRKHPEHIVF LGPLCTYSLT VLVGTGHSVY PLLPVIYDVA
YKKGIRPERP LAMATVASQM GITASPIAAA AAVVLATAVD NNLDINLLDV LMVTIPATLT
GLLVACTWSL KRGKDLDKDE EFQARLTDDE FREALTDPKA DEVQTPQAES TAKKGLTVFL
LGIFAVIMVA MFSKQILPAG VSMSVAIQFM MLSVGGVILL ATNISPKKIV TSNVFTAGMT
AVIIIFGIAW MSDTIIEHHK TYLVSAVSDI VSVYPWTFAI AMFVSSIFLK SQAAVLTIML
PLGYSLGIPA PVLIGVLPAC YAYFFFPFYP SDLAAISFDR TGTTHIGKYV LNHSFIIPGF
IGVVTATFVG YFISMAIN
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