Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3837 |
Symbol | |
ID | 4280728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4575779 |
End bp | 4576642 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638136658 |
Product | hypothetical protein |
Protein accession | YP_752501 |
Protein GI | 114564987 |
COG category | [S] Function unknown |
COG ID | [COG1561] Uncharacterized stress-induced protein |
TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCAAA GCATGACAGC CTACGCTCGT ATCGAGCACA AAGCACAATG GGGCACTGCC TCATGGGAAA TCCGTTCAGT CAACCAGCGC TACTTAGAAA CCTACCTGCG CCTACCTGAG CAGTTTCGCA GCTTTGAACC TGTCTTACGC GACCGCTTAC GTAAACGCCT TAATCGCGGC AAAATCGAAG TTAATTTACG TTATGAACTC GCCGACAACA GCAGTAATGA ATTACAACTG AATCAAGATT TAGCCAAACA GCTATTAAGT GCAGCAAACT GGTTAAAACA AGAGGCAGGA CAAGGCGAAC TCAGCCTAAC AGATGTACTG CGTTGGCCTG GCGTGCTATC GGCAGCAGAG CAAGATATGG ATAGCGTAGG TGCCGATTTA ATGATCGCGT TCGACAGTGC TATCGATCAG TTTATCGAAG CTCGCGGCCG TGAAGGTGAA GCGATTAAAG ACATGCTACT AACCCGTTTA GACGGCGTAA TGGAGCAAGT GAACGTTGTG CGTGAACACA TGCCAACAGT AATGCAGTAT CAACGCGACA AATTAACTAA CCGCTTAGCC GATATTACTG GTGAATTAGA CCCTGCCCGT ATCGAACAAG AAATGGTGTT ATTGGCGCAA AAGCAAGATG TCGCCGAAGA AATGGACCGC CTTGAAGCTC ACGTAGCTGA AGCTCGCCGC ATTCTAAAAA AAGGTGGCAG CGAAGGCCGC CGTCTAGACT TTATGATGCA AGAATTTAAC CGCGAATCAA ATACCCTAGC CTCAAAATCA ATCAGCGCAG AAATCACTTC AGCTGCAGTT GAGCTAAAAG TACTGATTGA GCAAATGCGC GAGCAGATCC AAAACGTAGA GTAA
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Protein sequence | MIQSMTAYAR IEHKAQWGTA SWEIRSVNQR YLETYLRLPE QFRSFEPVLR DRLRKRLNRG KIEVNLRYEL ADNSSNELQL NQDLAKQLLS AANWLKQEAG QGELSLTDVL RWPGVLSAAE QDMDSVGADL MIAFDSAIDQ FIEARGREGE AIKDMLLTRL DGVMEQVNVV REHMPTVMQY QRDKLTNRLA DITGELDPAR IEQEMVLLAQ KQDVAEEMDR LEAHVAEARR ILKKGGSEGR RLDFMMQEFN RESNTLASKS ISAEITSAAV ELKVLIEQMR EQIQNVE
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