| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3820 |
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| Symbol | |
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| ID | 4280711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4555534 |
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| End bp | 4557102 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136641 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_752484 |
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| Protein GI | 114564970 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAATA GAGTCATAAT TTTTGATACT ACCTTACGTG ATGGTGAGCA AGCATTAGCA
GCCAGTTTAA CCGTTAAAGA AAAGCTACAA ATTGCCCTAG CACTTGAGCG TTTAGGCGTG
GATGTCATGG AAGTTGGGTT TCCTGTTTCT TCTCCGGGCG ATTTTAAATC GGTGCAGACG
ATTGCTAAAA CCATTAAAAA CAGCCGTGTG TGTGCGCTAT CTCGTGCACT TGAAAAAGAC
ATTGATGCTG CAGCCCAAGC TTTGTCGGTA GCCGATCAGT TTCGAATTCA TACCTTTATT
TCTACCTCGA CCATTCACGT TGAAAGTAAA TTAAAGCGCT CTTTTGATGA TGTATTAGAA
ATGGCCGTTA ATGCGGTTAA ATACGCCAGA CGATTTACGG ACGATGTTGA GTTTTCATGT
GAAGATGCTG GTCGTACACC AATAGACAAT TTGTGTCGTA TGGTTGAAGA GGCCATTAAA
GCTGGTGCTC GTACCATTAA TATTCCTGAT ACCGTTGGTT ATACAGTACC AAGTGAGTTT
GGTGGGATTA TTCAAACCTT ATTTAATCGA GTTCCGAATA TCGATCAAGC AGTGATCTCG
GTTCATTGTC ATGACGATTT AGGTCTGTCG GTCGCTAATT CCATCGCAGC AGTTGAAATG
GGCGCGCGCC AAGTTGAATG TACTATTAAT GGTATTGGTG AACGTGCCGG TAACTGCTCG
TTAGAAGAAA TCGCCATGAT CCTTGCTACC CGTAAAGGTT TGCTTGATTT GGATTGTGGA
ATTAACGCCA AAGAAATCCA CCGCACCTCA TCGCTAGTCA GCCAGTTATG TAACATGCCG
ATCCAAGCTA ATAAGGCGAT TGTGGGTACC AATGCATTTT CTCATTCGTC AGGCATTCAC
CAAGACGGTA TGCTTAAAGC AAAAAATACT TACGAGATTA TGACACCGGA AAGTATTGGC
TTAAACCGTA ATAACTTGAA CATGACTTCA CGCTCTGGTC GCCATGTGAT TAAACACCGC
ATGGAAGAAA TGGGCTACAA ACCAACTGAC TATGACATGG ACAGCCTTTA CGAGCAGTTT
TTAACCCTAG CGGATAAGAA AGGCCAAGTG TTCGATTACG ATTTAGAAGC ATTGGTATTT
ATGGAGTCGC AAGCGCAAGA CGACGATAAG TACCAGCTTC AGCACATGAT GGTGCATTCA
GATTCGACTG AAGGTGTAGC GACTGCCACG GTACGTATTG CTGTAGATGG TAAAGATATT
ACTGAGGCTG CCACAGGAAA TGGTCCTGTG GATGCGGCAT ATAATGCCAT TGCTCGAGCA
ACAGATCGCA AAATCAATAT TACTAATTAC AAGTTGAGTG CAAAAGGCGA AGGTCAAAAT
GCGCTTGGAC AAGTTGATAT TACCGCAAAA TATAATGAAC AAATGTTCCA CGGCGTAGGC
TTAGCAACAG ACGTCGTTGA AGCATCAGCT CAAGCGTTAG TGCATGTGAT GAACTTAGTG
TACCGCGCAG ATAAAGTGGC TGACTTTAAA CAACAGATCC ATAAAGAAAG GGAGTTAGGT
GGCGTATGA
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| Protein sequence | MSNRVIIFDT TLRDGEQALA ASLTVKEKLQ IALALERLGV DVMEVGFPVS SPGDFKSVQT
IAKTIKNSRV CALSRALEKD IDAAAQALSV ADQFRIHTFI STSTIHVESK LKRSFDDVLE
MAVNAVKYAR RFTDDVEFSC EDAGRTPIDN LCRMVEEAIK AGARTINIPD TVGYTVPSEF
GGIIQTLFNR VPNIDQAVIS VHCHDDLGLS VANSIAAVEM GARQVECTIN GIGERAGNCS
LEEIAMILAT RKGLLDLDCG INAKEIHRTS SLVSQLCNMP IQANKAIVGT NAFSHSSGIH
QDGMLKAKNT YEIMTPESIG LNRNNLNMTS RSGRHVIKHR MEEMGYKPTD YDMDSLYEQF
LTLADKKGQV FDYDLEALVF MESQAQDDDK YQLQHMMVHS DSTEGVATAT VRIAVDGKDI
TEAATGNGPV DAAYNAIARA TDRKINITNY KLSAKGEGQN ALGQVDITAK YNEQMFHGVG
LATDVVEASA QALVHVMNLV YRADKVADFK QQIHKERELG GV
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