Gene Sfri_3810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3810 
Symbol 
ID4280701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4543898 
End bp4545646 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content44% 
IMG OID638136631 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_752474 
Protein GI114564960 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAGAC AAGCAAAGCA AAAATTAGGT CACGAACTTA TTCCATGGCG TTTATACGTT 
GTGGTGGGGT TCGTTTTGTT GTTATTTTGC AGTCTAGTTG CGCGTGCGGC CTATATTCAA
ATTATTGAGC CCGATAAACT GCGTCACGAA AGTGATATGC GCACACTGCG CACAACTAGT
AATCAAGTTC AGCGAGGCTT AATCACCGAT CGTAATGGCG ATATGCTCGC GGTTAGTGTA
CCTGTGCGTG CTGTGTGGGC TGATCCTAAA CATGCCCATG ATCAAGATGC ATTTAAAGAC
ATGCGACGTT GGCAAGCCCT TGCAGATGTT CTGCAAGAAC CTGTCGACGA ATTGGTCAGA
AAAGTCAAAA ACAATCCTAA AAAGCGCTTT GTATATCTTA AACGTCAAGT GACCTCTGCT
GTTGCTGACT ATATTGAGCA GCTTAAAATT GGTGGTATTT ACCTTAAATC AGAATCCCGT
CGTTACTATC CTGCTGGTGA AACGGCTGCA CAGTTAATTG GTATCACTAA TATCGATGAT
GTGGGCATTG AAGGCATTGA AAATACTTAT AATACTTGGT TAACAGGAAC GCCCTCAAAG
CAAAAAGTAC GTAAAGCTCG CGATGGCAGT GTGGTTGAAC GTTTGGATAT CGTGCAAGAA
GGCGAAAGTT CTAACGATTT AGTGCTTAGT ATTGATCAAC GTATTCAGCA GTTGGCATAT
CGTGAATTGA AACGTGCGAC AGAAGTATAC CAAGCGACGT CTGGGTCTGT GGTGGTTATC
GATGTGACCA CGGGCGAAGT ATTAGCGATG GTGAATACTC CTTCATATAA TCCTAATGCC
CGAGATAATT TACAGCCACA TCGTATGCGC AACCGCGCCT TAACTGACAC ATTCGAACCA
GGGTCTACGA TTAAGCCTTT TGTTGTTGCT GCAGCCCTTG ATGCCGGCAC AGTGAAAGTG
AATGAATTAA TATCGACATC ACCAGGGTGG ATGCGGATTG GTGGGCGTCA AGTTCGCGAT
TCGAGTAACT ATGGTGATAT GACGTTAGCC AAAATTTTGG TTAAATCGAG TAACGTGGGA
ATTAGTAAGT TGTCCTTGTC TATGCCCGTT GAACAATTAC TCGGTACATA CCAATCCATG
GGATTAGGCA ATTATACGGG AATTAATTTA ACCGGTGAAA GTGCGGGTTT GATCCATGAC
CGTAATCGTT GGTCTGACTT TGAACGTGCC ACCTTGTCTT TTGGTTATGG CCTTACGGCG
ACACCGTTAC AAATAGCACG TATGTACGCC ACGTTAGGCA GTGGTGGAAT ACTCTATCCT
GTGTCAATTT TAAAACTGAG ACAACCACCT AAAGGCGAGC AAGTCATTTC AAATAAAGTT
GCCTATGACG TAATGGAAAT GCTCGTTGGG GTAACTGAAA CGGGAGGCAC AGGAACCAAA
GCACACATTG ATGGCTACCC CGTTGCTGGT AAGTCAGGTA CAAGTCGTAA AGCCATTGCC
GGTGGTTATG GCGATGATTA CGTTGCTTTA TTTGCTGGTG TAGCTCCCGT TCATAATCCT
CGCTTGGCTA TTTCAGTTGT GATTAACGAA CCCAAAGGCG ACAAATATTA CGGTGGTGAT
GTTTCCGGCC CTGCTTTTGC CAAAATTATG TCTGGTGCCT TGCAAATGCT TAATGTAGAA
CCAATTTCAG AGCAGGAGGC TGTTAATTTG GCCACCGCGC GAGGAGCGCA AAATAATGTT
ATTAAATGA
 
Protein sequence
MARQAKQKLG HELIPWRLYV VVGFVLLLFC SLVARAAYIQ IIEPDKLRHE SDMRTLRTTS 
NQVQRGLITD RNGDMLAVSV PVRAVWADPK HAHDQDAFKD MRRWQALADV LQEPVDELVR
KVKNNPKKRF VYLKRQVTSA VADYIEQLKI GGIYLKSESR RYYPAGETAA QLIGITNIDD
VGIEGIENTY NTWLTGTPSK QKVRKARDGS VVERLDIVQE GESSNDLVLS IDQRIQQLAY
RELKRATEVY QATSGSVVVI DVTTGEVLAM VNTPSYNPNA RDNLQPHRMR NRALTDTFEP
GSTIKPFVVA AALDAGTVKV NELISTSPGW MRIGGRQVRD SSNYGDMTLA KILVKSSNVG
ISKLSLSMPV EQLLGTYQSM GLGNYTGINL TGESAGLIHD RNRWSDFERA TLSFGYGLTA
TPLQIARMYA TLGSGGILYP VSILKLRQPP KGEQVISNKV AYDVMEMLVG VTETGGTGTK
AHIDGYPVAG KSGTSRKAIA GGYGDDYVAL FAGVAPVHNP RLAISVVINE PKGDKYYGGD
VSGPAFAKIM SGALQMLNVE PISEQEAVNL ATARGAQNNV IK