Gene Sfri_3807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3807 
SymbolmraY 
ID4280698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4539953 
End bp4541035 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content44% 
IMG OID638136628 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_752471 
Protein GI114564957 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTTT ATCTAGCCGA GTATTTAACC CAATTTTATA GCGGGTTTAA CGTTTTTTCA 
TATGTAACGT TCCGGGCTAT TTTAGGCTTG TTAACTGCAT TGGTGTTTAG TTTGTGGTGG
GGGCCGATTT TAATTAAGCA CCTGCAAACG CTGCAAATTG GTCAAGTCGT TCGTGATGAC
GGTCCAGAAT CGCATTTCAG TAAGCGTGGA ACACCGACAA TGGGCGGTAT TCTTATCCTT
GCGGGCATTT TTATTAGTGT TCTGCTTTGG GGCGACTTAT CTAATCGTTA TGTGCTTGTC
ACTTTATTTG TACTCGCCAG TTTTGGTGTC ATTGGTTTTA TTGATGATTA TCGTAAAGTG
GTAAAGAAAG ATTCTAAAGG CCTAATTGCA CGTTGGAAAT ATGCGTTGCA GTCAATTGCC
GCTTTAGTTG TTGCGGTGTA TTTGTATAGC TCATCAACCA TGGTTGGCGA AACACAGTTA
GTTGTGCCGT TTTTTAAAGA TATCATGCCG CAACTGGGCT TTATGTTTAT TTTATTAGCT
TACTTCACCA TTGTAGGTGC CAGTAATGCA GTGAACCTAA CCGACGGCTT AGATGGCTTA
GCGATTATGC CAACCGTGAT GGTTGCGGCT GCGTTTGCCT TAATCGCTTA CTTATCTGGT
CATGCTCAAT TTGCCAGTTA TTTGCACCTG CCTCATTTGC CATTAGCGGG TGAATTAGTG
ATTGTGTGTA CGGCTATGGT CGGCGCAGGT TTAGGTTTTT TATGGTTTAA CACCTATCCA
GCTCAAGTGT TTATGGGCGA TGTGGGCTCA TTAGCGTTGG GTGCCGCATT GGGTGTGATT
GCTATCCTGG TTCGCCAAGA AATTTTATTG GTGATCATGG GCGGCGTGTT TGTTATGGAA
ACGGTATCGG TGATCTTGCA GGTGGGCTCG TATAAGTTAC GTGGTCAGCG AATTTTCCGT
ATGGCGCCTA TTCATCATCA CTATGAGTTA AAAGGGTGGC CAGAGCCGCG CGTTATTGTG
CGCTTTTGGA TTATCTCGTT GTTTTTAGTG TTACTGGGTC TAGCGACTCT AAAATTACGC
TAA
 
Protein sequence
MLVYLAEYLT QFYSGFNVFS YVTFRAILGL LTALVFSLWW GPILIKHLQT LQIGQVVRDD 
GPESHFSKRG TPTMGGILIL AGIFISVLLW GDLSNRYVLV TLFVLASFGV IGFIDDYRKV
VKKDSKGLIA RWKYALQSIA ALVVAVYLYS SSTMVGETQL VVPFFKDIMP QLGFMFILLA
YFTIVGASNA VNLTDGLDGL AIMPTVMVAA AFALIAYLSG HAQFASYLHL PHLPLAGELV
IVCTAMVGAG LGFLWFNTYP AQVFMGDVGS LALGAALGVI AILVRQEILL VIMGGVFVME
TVSVILQVGS YKLRGQRIFR MAPIHHHYEL KGWPEPRVIV RFWIISLFLV LLGLATLKLR