| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3803 |
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| Symbol | murC |
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| ID | 4280694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4534842 |
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| End bp | 4536299 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136624 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_752467 |
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| Protein GI | 114564953 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.595794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTAAGA CAGAAAGATA CGCACAGCTT CGTAGCATGA TCCCAGAAAT GAGACGGATC
AAGCGCATTC ATTTTGTTGG CATCGGTGGT GCCGGCATGG GTGGTATTGC GGAAGTGCTT
GTGAACGAAG GCTATCAAAT AAGCGGCTCA GATATCGCTA TCAATAGCGT GACTGAACGT
TTGGCGAGTC TTGGCGCAAA AATTATTATT GGCCATCAGG CCCAAAGTGT TGAGCAGGTA
GATGTTGTTG TGGTTTCTAC AGCCATTAAC CCGCAAAATC CTGAGATTAT TGCCGCTAAA
GAATTACGTA TTCCGATTGT GCGCCGTGCA GAGATGCTGG CTGAGTTAAT GCGCTATCGT
CATGGTGTTG CGATTGCCGG TACTCATGGT AAAACCACCA CGACGAGCTT AATTGCCAGT
GTATATGGTC AAGCCGATCG TGACCCAACA TTTGTGATTG GTGGTTTACT TAATAGTGCA
GGTACTAATG CCCGCTTAGG CACCAGCCGG TACCTTATTG CTGAAGCAGA TGAAAGCGAT
GCAAGCTTTT TGCATTTGCA GCCGATGGTC AGTGTGATCA CCAATATTGA AGCCGATCAC
ATGGATACTT ATGGTGGCGA CTTTGAGAAA TTGAAAACCA CTTTTGTCGA CTTTTTACAT
AATCTGCCAT TTTATGGTGT GGCAGTAATG TGTATTGATG ATGAAGTGAT CCGCGAAATT
ATGCCACGTA TTGGCCGCCA AGTTGTCACC TATGGTTTCA GTGAAGAGGC TGATGTTCAG
GCAATTAATT TTGCACAAAA TGGTCATCAG TCAAGCTTTA CTGTTAAGCG TCATGGCAAA
GATAATGTCG ACATTGTGCT TAATTTGCCA GGTGAACATA ACGTTCTTAA CGCTTTAGCC
GCAATTGCTG TCGCCAGTGA AGATGACATT GATGATAGTG CTATTGTACA AGCACTTGCA
GAGTTTGAAG GTATAGGTCG TCGTTTCCAG CATTTAGGTG AATTTGAAAC ACCTAATGGC
AGTGTAATGC TCGTGGACGA CTACGGTCAT CATCCAAGTG AAGTATTAGC AACGATTAAA
GCAGCGAGAG CAGGTTGGCC AGACAAGCGT TTAGTGATGG CATACCAACC GCATCGTTAT
AGCCGTACGC GTGACTTATA TGAAGACTTT GTCGATGTAT TGTCACAGGT CGATTGTTTA
TTATTATTAG ATGTTTATGC CGCGGGTGAA GCTCCGATCC CGGGTGCTGA TGGGCGCGCT
TTATGCCGTT CAATTAGATT ACGAGGTCAA ATTGACCCTA TTTTTATCGC CAGTCCAGAT
CAACTAGCGG CAGTATTACC TGATGTGTTG CAGCATGGGG ATTTATTTAT GACTCAAGGT
GCAGGCAATA TTGGGGCTTT ATCGAAAGAA TTAGCCCAGA GTAATTTGGG TTGTAAAGTG
CTTGTAGAAG AGCAATAA
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| Protein sequence | MTKTERYAQL RSMIPEMRRI KRIHFVGIGG AGMGGIAEVL VNEGYQISGS DIAINSVTER
LASLGAKIII GHQAQSVEQV DVVVVSTAIN PQNPEIIAAK ELRIPIVRRA EMLAELMRYR
HGVAIAGTHG KTTTTSLIAS VYGQADRDPT FVIGGLLNSA GTNARLGTSR YLIAEADESD
ASFLHLQPMV SVITNIEADH MDTYGGDFEK LKTTFVDFLH NLPFYGVAVM CIDDEVIREI
MPRIGRQVVT YGFSEEADVQ AINFAQNGHQ SSFTVKRHGK DNVDIVLNLP GEHNVLNALA
AIAVASEDDI DDSAIVQALA EFEGIGRRFQ HLGEFETPNG SVMLVDDYGH HPSEVLATIK
AARAGWPDKR LVMAYQPHRY SRTRDLYEDF VDVLSQVDCL LLLDVYAAGE APIPGADGRA
LCRSIRLRGQ IDPIFIASPD QLAAVLPDVL QHGDLFMTQG AGNIGALSKE LAQSNLGCKV
LVEEQ
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