Gene Sfri_3799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3799 
SymbollpxC 
ID4280690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp4530394 
End bp4531314 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content43% 
IMG OID638136620 
ProductUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 
Protein accessionYP_752463 
Protein GI114564949 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000000708565 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTTC AAAGAACTGT TCAAAAAATG GTGAAGAGCA CTGGGGTCGG ATTGCATTCC 
GGCAACAAAG TGACTCTATG CATTATGCCC GCACCAGTGA ATACAGGGAT TGTACTAAAG 
CGTACCGACC TTAGCCCAGC TGTGTCTATT CCAGCAAAAG CTGACATGGT TCGTGAAACG 
ACAATGTGTA CCGCCCTTGT AAACGATGCT GGTATCAGGA TATCAACAAT TGAGCATTTG 
TTTGCGGCAC TTGCCGGCTT AGGCATCGAT AATGCAATTA TCGAAGTCGA TGCACCAGAA 
ATCCCGATTA TGGATGGCAG TGCAAGCCCA TTTGTGTTCT TACTGCAAAG TGCAGGAATT 
AAAGAACAAG CAGCAGCTAA AAAATACCTA AAAATCATCA AACCTGTGCG TGTTGAAGAT 
GGCGATAAAT GGGCTGAGTT AAAGCCTTTT AAAGGCTTTA GAGTTGATTT TAGAATTGAC 
TTTGATCATC CAGAAATTGC TCGTAGTCAA CAACACATGG TGATGGACTT TTCGACCTCA 
GCGTTTGTGA AAGACATTAG TCGTGCCAGA ACATTTGGTT TTATGCGAGA TATTGAATAC 
TTACGTGCGA ATAATCTAGC ACTAGGTGGC AGCATGGAAA ATGCCGTTGT ACTTGACGAA 
TATCGTGTAT TAAACCCTGA TGGTCTGCGT TATGAAGACG AATTCGTTAA GCATAAAATC 
CTCGATGCAT TCGGTGACTT ATATGTTGCT GGTCATGCAA TCGTCGGCGA GTTTTCAGCT 
TATAAAACTG GTCATGCGTT GAACAATCAA CTTGTACGTG CATTACTTGC TCAGCAAGAT 
GCGTGGGAGT TGGTAAGCTT TGATAAAGAG GCTGATGTGC CTGTCAGTTT CATGGTTCCG 
GGTGCATTAG CGCACGTTTA A
 
Protein sequence
MIFQRTVQKM VKSTGVGLHS GNKVTLCIMP APVNTGIVLK RTDLSPAVSI PAKADMVRET 
TMCTALVNDA GIRISTIEHL FAALAGLGID NAIIEVDAPE IPIMDGSASP FVFLLQSAGI 
KEQAAAKKYL KIIKPVRVED GDKWAELKPF KGFRVDFRID FDHPEIARSQ QHMVMDFSTS 
AFVKDISRAR TFGFMRDIEY LRANNLALGG SMENAVVLDE YRVLNPDGLR YEDEFVKHKI 
LDAFGDLYVA GHAIVGEFSA YKTGHALNNQ LVRALLAQQD AWELVSFDKE ADVPVSFMVP 
GALAHV