Gene Sfri_3798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3798 
Symbol 
ID4280689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4529937 
End bp4530389 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content43% 
IMG OID638136619 
Producthypothetical protein 
Protein accessionYP_752462 
Protein GI114564948 
COG category[S] Function unknown 
COG ID[COG4701] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000270613 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC CCCCTCAAGA TCTCAGCAAT TTAGTTCATT TGTCTGGGAG ACTGCCTGAA 
CTGGCCGAGA AAGCAGAACT ACTTAATAAT CTGAATCGTT ATGTAAAACA GACGTTAAAT
GGTCCTGTGG CAGAGCAGCT CAAAGTCGCT AATCTCCGCC AGGGTGTTCT TGTTATTGAA
ACGACATCTG CAGCATGGGC TGCGAGAATA AACTTTCAAA AGCAGAAGCT ATTAAAACAG
CTTCAAACTG ACACGCTTCC GATGCTTACT GCTATTGAGG TGAAAGTCAA TCCTGGACTT
GCCTTAGCAA AACCACAATC CCAACCTAAT CAAAATGTGA TCAGCACCAC TGCAGCACAA
CATATTGAAG CATTAGCTGC ACATGTTGAT GGTTCTTTAG GTGAAAAACT AAAACGGCTG
GCTGCATTAG CCAGCCGTAA TAGGCAATCT TAA
 
Protein sequence
MKKPPQDLSN LVHLSGRLPE LAEKAELLNN LNRYVKQTLN GPVAEQLKVA NLRQGVLVIE 
TTSAAWAARI NFQKQKLLKQ LQTDTLPMLT AIEVKVNPGL ALAKPQSQPN QNVISTTAAQ
HIEALAAHVD GSLGEKLKRL AALASRNRQS