| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3797 |
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| Symbol | |
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| ID | 4280688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4529010 |
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| End bp | 4529909 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136618 |
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| Product | peptidase M23B |
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| Protein accession | YP_752461 |
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| Protein GI | 114564947 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000938222 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTAA CAGTTTTTAT CCAAGGTCGA AATGGTGTAA CGCGCTGGCA ACCAAGTAAG
CGTTGGTTAC TCCTACCTAT TATTCTAATG GCCACCGGCA CAGGAATATA TCAATATAGC
ACTGAGCGTT TTGCTAACCA ACAAGCGAAA GTTGATGAAA ATAAACAGCT TCGCCAACAG
CAAAAGCAAC AAGTGGTAGA ACTCAAAACT GCTACAGAGA CCCAGTTAGC AACTTTGGTT
GCTCATGTGG CAAAAATGCA GGCCAAAATC ACCCGACTTG AAGCCTTAGG GCTGCAAGTA
GCGCAAAATA ACCTCCTTGA TGACCAATTT GATTTCTCAA CAGAAGTCGG TATCGGCGGG
TTAAGCGAAA TCGGCAATGG TGTCGAATTA AGTCAGCTTA TCGATGAAAT GAATAAGTTG
GCATCTAGAA TTGATAATAA TAATGTTCAG CTATCACTAC TTGAAACAGT AGCATCTAAT
CTCCATATAG ATGAAGAGCG TTATATATCA GGGCGGCCAA TCGATAAAGG TTGGTTATCT
TCGCCCTATG GTTTACGAAA TGACCCTTTT AGTGGCCGAC GAACAATGCA TAAAGGTATT
GATTTTGCCG GCAAAGAAGG GGCAGATGTT ACAACTACTG CTGCAGGTGT TGTAACATGG
TCAGGAAGCA TGCTTGGATA TGGCGAGTTA GTTGAGATAG ATCATGGTAA TGGTCTTCGT
ACTCGCTATG GACATAATAA ATCTCTGTCA GTAAACGTAG GTGACGTCGT TGCCAAAGGC
GATAAAATTG CCAGTATGGG AAGCACAGGC CGTTCAACCG GCCCCCATGT GCATTACGAA
GTGTTGCGCG GTAAACAACA AATAGATCCA CAGAAATACG TCTACCGCAA AGCAAGTTAA
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| Protein sequence | MSVTVFIQGR NGVTRWQPSK RWLLLPIILM ATGTGIYQYS TERFANQQAK VDENKQLRQQ
QKQQVVELKT ATETQLATLV AHVAKMQAKI TRLEALGLQV AQNNLLDDQF DFSTEVGIGG
LSEIGNGVEL SQLIDEMNKL ASRIDNNNVQ LSLLETVASN LHIDEERYIS GRPIDKGWLS
SPYGLRNDPF SGRRTMHKGI DFAGKEGADV TTTAAGVVTW SGSMLGYGEL VEIDHGNGLR
TRYGHNKSLS VNVGDVVAKG DKIASMGSTG RSTGPHVHYE VLRGKQQIDP QKYVYRKAS
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