Gene Sfri_3795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3795 
Symbol 
ID4280686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp4519317 
End bp4519796 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content40% 
IMG OID638136609 
ProductISSod10, transposase OrfA 
Protein accessionYP_752459 
Protein GI114564945 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000216362 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATC TCAATCTTGC AGCATTAGTT AAATCTGAGA AACGCGCACG TAAACGTATG 
CGTTATCTCG CCTTACTTCA TTTTACCGAA GGTCATTCTC GTACTGCTAT AGCCAACATG 
CTGAAGGTCA GTAGAACCAG TGTAAATACT TGGGTTACTC ATTATTTAAC TCATGGCATT 
AGCGGCCTAG ATGATAAACA TAATCCAGGT AGACCCGCTC AACTATCGGC GAAACAACTG 
GTAAATCTGA AAGAATTTGT ACAACGTCAA AGCTTGTCTG AGAGTGGCGG AAGATTGATG 
GCAAGAGATG TCAGTCTTTT TATTCAGTCT GAATTTGGGG TGACCTTTAA ACAGGCAAAT 
ATCTACAGAT TACTGCATCA ATTAGGATTG TCATGGATAA CGACCCGCTC TCGACACCCA 
AAACAATCTC AAGATATTCA GGACGCTTTT AAAAAACTTC CAGCTGTCAA CGATCCTTAA
 
Protein sequence
MNNLNLAALV KSEKRARKRM RYLALLHFTE GHSRTAIANM LKVSRTSVNT WVTHYLTHGI 
SGLDDKHNPG RPAQLSAKQL VNLKEFVQRQ SLSESGGRLM ARDVSLFIQS EFGVTFKQAN 
IYRLLHQLGL SWITTRSRHP KQSQDIQDAF KKLPAVNDP