Gene Sfri_3789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3789 
Symbol 
ID4280682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4509664 
End bp4510059 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content39% 
IMG OID638136602 
Productmutator MutT protein 
Protein accessionYP_752455 
Protein GI114564941 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAAAAA GAATCCATGT CGCTGTCGGT GTCATCATTA ATCAAGATAA GCACATTTTA 
CTGGCTAAAA GGCTCGGACA CCTTCATCAA GGAGGAAAGT GGGAATTCCC AGGCGGTAAG
GTAGAAACAA ATGAAACGGT TACTGAAGCG TTAATCAGAG AGCTCAAAGA GGAAGTCAAT
CTTGATGTAT CTAATTCAAC TCCCTTCATG GACATCAGTC ATGATTATCC AGATAAACAT
GTCAGGCTCG ACATTCATTT AATTACTGAA TTTTCAAACC AAGCGAAAGG TATGGAGCAG
CAACAAATTG AATGGGTACC GATCGATAGA ATTGCGGAAT ATGATTTCCC TGAAGCTAAT
AAACCTATAG TAGAAAAGAT ATTAGCTGAA CTCTGA
 
Protein sequence
MQKRIHVAVG VIINQDKHIL LAKRLGHLHQ GGKWEFPGGK VETNETVTEA LIRELKEEVN 
LDVSNSTPFM DISHDYPDKH VRLDIHLITE FSNQAKGMEQ QQIEWVPIDR IAEYDFPEAN
KPIVEKILAE L