Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3787 |
Symbol | |
ID | 4280680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4508651 |
End bp | 4509385 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638136600 |
Product | hypothetical protein |
Protein accession | YP_752453 |
Protein GI | 114564939 |
COG category | [S] Function unknown |
COG ID | [COG4582] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGATT TAATTTATGA ACAACCATTA AATGAAAAAA TACGCAGTTA TTTACGTATA GAAAACCTTG CCCTACAGTT GCAACAGCAT GCCGAACAAG ATAATCAACA TCAATGTTTT AGTCCCTTAT TTGCTCTTGC CGAACTAACT GAACGTTGTG ATTATCGCAC CGACATTTTA AAAGATATTG AAAAACAGAT TCAGATAATT TCTCATTGGC GTACTCACTC AAATGTAGAT AACGCTCAAG TGGATCAACT CACCCAAAAG CTAATCGCAT TAAAATCGCC ACTGCAAGCA CAAGAAAGAA TTGGCTGCAG CCTTAAACAA GACAAATTTA TCTCAGCCTT ACGACAGCGT TTCAATATGA CTGGAGCATA CTGTAATTTT GACTTTCCTC AACTGCACTT TTGGCTTGGC AAAGACTGGC AACATCGACA GCAAGATATT AAAAGTTGGC TTATTCAATA CCAGCCTCTA CTAGCCCCAA TAGCATTACT TCTGGAACTC ATTCGAACGA CAGCAGATTT TGGTTTATAC CAAGCTCCAG TGGGTTTCTA TCAAGGCAAC TCTGTACAAC CGTTGTCATT AATTCGAGTG CAAATAAATT CCAATCAAAA CTGCTACCCT ACCGTCAGCG GAAATCGAAA TCGTTATGCA ATTCATTTTG TAGATTTCGA TTTACACCGT CATACCAGTG AAACTGTTCA GTTCTCACTA GCAACCTGCA CATAA
|
Protein sequence | MTDLIYEQPL NEKIRSYLRI ENLALQLQQH AEQDNQHQCF SPLFALAELT ERCDYRTDIL KDIEKQIQII SHWRTHSNVD NAQVDQLTQK LIALKSPLQA QERIGCSLKQ DKFISALRQR FNMTGAYCNF DFPQLHFWLG KDWQHRQQDI KSWLIQYQPL LAPIALLLEL IRTTADFGLY QAPVGFYQGN SVQPLSLIRV QINSNQNCYP TVSGNRNRYA IHFVDFDLHR HTSETVQFSL ATCT
|
| |