Gene Sfri_3787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3787 
Symbol 
ID4280680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4508651 
End bp4509385 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content39% 
IMG OID638136600 
Producthypothetical protein 
Protein accessionYP_752453 
Protein GI114564939 
COG category[S] Function unknown 
COG ID[COG4582] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATT TAATTTATGA ACAACCATTA AATGAAAAAA TACGCAGTTA TTTACGTATA 
GAAAACCTTG CCCTACAGTT GCAACAGCAT GCCGAACAAG ATAATCAACA TCAATGTTTT
AGTCCCTTAT TTGCTCTTGC CGAACTAACT GAACGTTGTG ATTATCGCAC CGACATTTTA
AAAGATATTG AAAAACAGAT TCAGATAATT TCTCATTGGC GTACTCACTC AAATGTAGAT
AACGCTCAAG TGGATCAACT CACCCAAAAG CTAATCGCAT TAAAATCGCC ACTGCAAGCA
CAAGAAAGAA TTGGCTGCAG CCTTAAACAA GACAAATTTA TCTCAGCCTT ACGACAGCGT
TTCAATATGA CTGGAGCATA CTGTAATTTT GACTTTCCTC AACTGCACTT TTGGCTTGGC
AAAGACTGGC AACATCGACA GCAAGATATT AAAAGTTGGC TTATTCAATA CCAGCCTCTA
CTAGCCCCAA TAGCATTACT TCTGGAACTC ATTCGAACGA CAGCAGATTT TGGTTTATAC
CAAGCTCCAG TGGGTTTCTA TCAAGGCAAC TCTGTACAAC CGTTGTCATT AATTCGAGTG
CAAATAAATT CCAATCAAAA CTGCTACCCT ACCGTCAGCG GAAATCGAAA TCGTTATGCA
ATTCATTTTG TAGATTTCGA TTTACACCGT CATACCAGTG AAACTGTTCA GTTCTCACTA
GCAACCTGCA CATAA
 
Protein sequence
MTDLIYEQPL NEKIRSYLRI ENLALQLQQH AEQDNQHQCF SPLFALAELT ERCDYRTDIL 
KDIEKQIQII SHWRTHSNVD NAQVDQLTQK LIALKSPLQA QERIGCSLKQ DKFISALRQR
FNMTGAYCNF DFPQLHFWLG KDWQHRQQDI KSWLIQYQPL LAPIALLLEL IRTTADFGLY
QAPVGFYQGN SVQPLSLIRV QINSNQNCYP TVSGNRNRYA IHFVDFDLHR HTSETVQFSL
ATCT