| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3777 |
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| Symbol | aceE |
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| ID | 4280670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4495826 |
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| End bp | 4498492 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136590 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_752443 |
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| Protein GI | 114564929 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.341316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAG ATATGCTTCA AGATTTAGAC CCATCAGAAA CCCAAGAGTG GGTTGATGCT
CTACAAGCTG TGTTAGAGCA AGAAGGGCCT GAACGTGCAC ACTTTTTACT CGAAAAATTA
ATCGACAAAG CTCGCCGTAA CGGTACTCAC TTACCGTATA ACGCGACTAC TGCGTATTTA
AACACGATTC CAGCAGGCCA AGAGCCAAAC ATGCCTGGCA ACCAAGAAAT GGAACGCCGT
ATTCGGGCGA TTATTCGCTG GAATGCATTG GCGATGGTGT TACGCGGTTC TAAGAAAGAT
TTAGAGCTTG GTGGCCATAT CTCAAGTTTC GCGTCTAGTG CGACAATTTA CGATGTGTGT
TTTAACCATT TCTTCCGTGC GCCTAACGAG CATGACGGTG GTGATTTGGT GTATTTCCAA
GGCCATATCG CACCCGGTAT TTATGCGCGT TCGTTCCTTG AAGGCCGTAT TACTGAAGAC
CAAATGGCCA ACTTCCGTCA AGAAGTTGAT GGCAAAGGTC TTTCTTCGTA CCCACACCCT
AAGTTAATGC CTACTTACTG GCAGTTCCCG ACGGTATCGA TGGGTCTAGG TCCTATTCAA
GCGATTTACC AAGCGCGTTA TTTGAAGTAT TTAACTGACC GTGGTTTAAA AGATTGCTCT
AAGCAGACTG TTTACTGTTT CTTAGGTGAC GGTGAGTGTG ATGAGCCAGA AGCATTAGGT
GCTATTGGTT TAGCTGCACG TGAAGAATTA GATAACTTAG TATTTATCGT TAACTGTAAC
TTACAGCGTC TTGATGGTCC TGTTCGTGGT AACGGTAAAA TTATCCAAGA ACTTGAAGGC
GAATTCCGCG GCGCAGGCTG GGAAGTGGTT AAAGTGATTT GGGGACGCTA TTGGGATCCG
TTATTGGCTC GTGATACTAG CGGTAAATTA TTGCAGTTAA TGGAAGAAAC CGTAGACGGT
GAATACCAAA ACTGTAAAGC CAAAGGCGGC GCGTACACGC GTGAGCATTT CTTTGGTAAG
TACCCAGAAA CTGCCGAAAT GGTTGCTAAC ATGTCAGATG ATGACATTTG GCGTTTAAAC
CGTGGTGGTC ATGATCCTGT TAAAGTTTAC GCTGCACTTG AACATGCACA AAAAACCAAA
GGTCGCCCAA CCGTTATTTT AGCTAAAACA GTTAAAGGTT ACGGTTTAGG TGATGCAGGC
GAAGGTAAAA ACATCGCTCA CAACGTGAAG AAGATGGGCG CTGAGTCTAT TCGTTACTTC
CGCGATCGTT TCAATATCCC GATCCCTGAT GACCAGCTAG AAGATTTGCC TTTCTATCAT
CCAGGTCCAG ACTCTGAAGA AGTGAAATAC TTAAAGAGTC GCCGTGAAGC ATTATTAGGT
TATTTACCGC AACGCCGTGA AAAATTCACT GAAGAGTTAG AAATTCCTTC ATTGAAAATT
TTTGATTCGA TTTTAAAAGG CTCTAATGGC CGTGAAATCT CGTCAACGAT GGCGTTTGTC
CGAGTATTAA CTGCGTTATT GAAAGACAAA GGTATTGGCA AGCGTATTGT GCCGATTATT
CCTGATGAAG CACGTACTTT TGGTATGGAA GGTTTATTCC GTCAAGTGGG TATTTATGCT
CACGAAGGCC AAAAATATAT TCCACAAGAT TCTGATCAAG TGGCGTACTA CCGTGAAGAT
AAAACCGGTC AGGTTTTACA AGAAGGTATT AACGAATTAG GCGCAATGTC ATCTTGGGTA
TCAGCTGCAA CCAGCTACTC AGTCAATAAC ATGCCAACAA TTCCGTTTTA CATCTACTAC
TCTATGTTCG GTTTCCAACG TATTGGTGAC ATGGCATGGG CTGCTGGCGA CATGCGCGCA
CGTGGTTTCT TAGTAGGTGG AACTTCAGGT CGTACAACAT TGAACGGCGA AGGTTTACAG
CATCAAGATG GTCATAGCCA CGTATTAGCT AATACTATTC CAAACTGTAT CTCTTACGAT
CCAACTTACG GTTATGAAAT TGCGGTTGTA GTGCAAGATG GTATTCGTCG TATGTATGGC
GAAAATCAAG AAGATATCTT CTACTACCTA ACCACAATGA ACGAAAACTA TGTTCAGCCA
GAAATGCCAG CCGGTGCCGA AGAAGGTATT GTCAAAGGTA TTTACAAGCT TGAAACAGTT
GCCGGTAGTG GTAAAGGTAA AGTGCAGTTA ATGGGTTGCG GTACGATACT TGAAGAAGTG
CGTAAAGCAG CACAAGCATT AGCAAAAGAC TTTGGCGTAA GCGCTGACGT ATTCAGTGTG
ACTAGCTTTA ACGAGTTAAC TCGTGACGGC CAAGCTGCTG AACGTTGGAA CATGTTGCAT
CCAACAGCTG AACCTAAGCA AGCGTATATT AGCCAAGTAT TATCTGCAGA CGCGCCAGCG
ATTGTGGCGA CTGACTATAT GAAGATATAC GGCGAGCAAT TACGTGCTTT CGTACCGACA
GACTATAAAG TACTTGGTAC TGATGGTTTT GGTCGTAGCG ATAGCCGCGC AAACTTACGT
CATCACTTTG AAGTAGATGC TAAGTTTATT GTTATTGCGG CACTGAAGTC TCTTGTTGAG
CGTAATGAAA TGCCTGTTGA TGTGTTGACT AAAGCCATCG CTGAATATGG TATTGATGCT
GACAAGATTA ACCCACAGTT CGCGTAA
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| Protein sequence | MSEDMLQDLD PSETQEWVDA LQAVLEQEGP ERAHFLLEKL IDKARRNGTH LPYNATTAYL
NTIPAGQEPN MPGNQEMERR IRAIIRWNAL AMVLRGSKKD LELGGHISSF ASSATIYDVC
FNHFFRAPNE HDGGDLVYFQ GHIAPGIYAR SFLEGRITED QMANFRQEVD GKGLSSYPHP
KLMPTYWQFP TVSMGLGPIQ AIYQARYLKY LTDRGLKDCS KQTVYCFLGD GECDEPEALG
AIGLAAREEL DNLVFIVNCN LQRLDGPVRG NGKIIQELEG EFRGAGWEVV KVIWGRYWDP
LLARDTSGKL LQLMEETVDG EYQNCKAKGG AYTREHFFGK YPETAEMVAN MSDDDIWRLN
RGGHDPVKVY AALEHAQKTK GRPTVILAKT VKGYGLGDAG EGKNIAHNVK KMGAESIRYF
RDRFNIPIPD DQLEDLPFYH PGPDSEEVKY LKSRREALLG YLPQRREKFT EELEIPSLKI
FDSILKGSNG REISSTMAFV RVLTALLKDK GIGKRIVPII PDEARTFGME GLFRQVGIYA
HEGQKYIPQD SDQVAYYRED KTGQVLQEGI NELGAMSSWV SAATSYSVNN MPTIPFYIYY
SMFGFQRIGD MAWAAGDMRA RGFLVGGTSG RTTLNGEGLQ HQDGHSHVLA NTIPNCISYD
PTYGYEIAVV VQDGIRRMYG ENQEDIFYYL TTMNENYVQP EMPAGAEEGI VKGIYKLETV
AGSGKGKVQL MGCGTILEEV RKAAQALAKD FGVSADVFSV TSFNELTRDG QAAERWNMLH
PTAEPKQAYI SQVLSADAPA IVATDYMKIY GEQLRAFVPT DYKVLGTDGF GRSDSRANLR
HHFEVDAKFI VIAALKSLVE RNEMPVDVLT KAIAEYGIDA DKINPQFA
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