| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3775 |
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| Symbol | |
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| ID | 4280668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4492187 |
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| End bp | 4493617 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136588 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_752441 |
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| Protein GI | 114564927 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000442431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACG AAATCAAAAC TCAAGTAGTC GTACTAGGAG CAGGCCCAGC AGGTTATTCT
GCGGCGTTTC GTGCTGCTGA CTTAGGCTTA GACACCATAA TTGTTGAGCG TTTCAGTACC
CTTGGTGGTG TGTGTCTGAA TGTTGGCTGT ATCCCTTCAA AAGCACTATT GCACGTAGCA
AAAGTCATTG AAGAAGCCAA AGCTGTTGCT GACCATGGTG TTGTTTTTGG TGAGCCAAAG
ATTGATTTAG ACAAATTACG TGGTTTTAAA AACAAAGTAA TTAGCCAGTT AACGGGCGGA
TTAGGCGGAA TGTCTAAAAT GCGTAAAGTT AACGTGGTTA ATGGTTTTGG TAAATTTACT
GGTCCTAATA GCTTAGAAGT CACTGCAGAA GATGGCACTG TGACCGTTGT TCAGTTTGAA
CAAGCGATTA TTGCTGCCGG TTCACGTCCA ATTAAATTAC CATTTATTCC ACATGAAGAC
CCACGTATTT GGGACTCAAC TGATGCACTT GAACTGAAAG AAGTTCCTGG TAAGTTATTA
GTAATGGGTG GCGGTATTAT CGGTCTAGAA ATGGGTACTG TGTATTCATC TTTAGGAAGC
GAAATTGACG TGGTTGAAAT GTTTGACCAA GTTATTCCTG CTGCAGATAA AGACGTTGTC
CGTGTATTCA CTAAGCAAAT CAAGAAGAAG TTTAATCTTA TTCTTGAAAC TAAAGTGACC
GCAGTTGAAG CAAAAGACGA CGGTATTTAC GTAACAATGG AAGGCAAGAA AGCACCTGCT
GAGCCTGTTC GTTACGATGC TGTTTTAGTG GCAATTGGTC GCTCACCAAA TGGTAAGTCT
CTTGCTGCTG AAAAAGCCGG TGTTAATGTT GATGAGCGCG GCTTTATCAA TGTTGATAAG
CAGTTACGTA CTAACGTTCC GCACATTTAT GCTATCGGTG ATATCGTTGG TCAACCTATG
TTGGCTCATA AAGGTGTGCA TGAAGGTCAT GTTGCCGCTG AAGTTATTGC GGGTATGAAG
CATTACTTTG ACCCTAAAGT GATTCCTTCA ATTGCTTATA CTGACCCAGA AGTAGCATGG
GTGGGTCTAA CTGAGAAAGA AGCAAAAGAG CAAGGTGTTG CTTATGAAAC AGCTACTTTC
CCTTGGGCTG CTAGCGGCCG TGCAATTGCA TCTGACTGCA GCGAAGGCAT GACCAAGTTA
ATTTTCGACA AAGAAACTCA TCGTATCATC GGTGGTGCTA TTGTTGGTGT TAACGGTGGC
GAATTATTAG GTGAAATTGG CCTAGCGATT GAGATGGGTT GTGATGCTGA AGATTTAGCA
TTAACGATCC ATGCTCACCC GACTTTATAT GAATCAATCG GTTTAGCTGC TGAAATGTAT
GAAGGTTCAA TTACTGACTT ACCTAACCCT AAAGCGGTTA AGAAGAAGTA A
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| Protein sequence | MSNEIKTQVV VLGAGPAGYS AAFRAADLGL DTIIVERFST LGGVCLNVGC IPSKALLHVA
KVIEEAKAVA DHGVVFGEPK IDLDKLRGFK NKVISQLTGG LGGMSKMRKV NVVNGFGKFT
GPNSLEVTAE DGTVTVVQFE QAIIAAGSRP IKLPFIPHED PRIWDSTDAL ELKEVPGKLL
VMGGGIIGLE MGTVYSSLGS EIDVVEMFDQ VIPAADKDVV RVFTKQIKKK FNLILETKVT
AVEAKDDGIY VTMEGKKAPA EPVRYDAVLV AIGRSPNGKS LAAEKAGVNV DERGFINVDK
QLRTNVPHIY AIGDIVGQPM LAHKGVHEGH VAAEVIAGMK HYFDPKVIPS IAYTDPEVAW
VGLTEKEAKE QGVAYETATF PWAASGRAIA SDCSEGMTKL IFDKETHRII GGAIVGVNGG
ELLGEIGLAI EMGCDAEDLA LTIHAHPTLY ESIGLAAEMY EGSITDLPNP KAVKKK
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