| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3762 |
|---|
| Symbol | argS |
|---|
| ID | 4280655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 4471963 |
|---|
| End bp | 4473708 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638136575 |
|---|
| Product | arginyl-tRNA synthetase |
|---|
| Protein accession | YP_752428 |
|---|
| Protein GI | 114564914 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0018] Arginyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00456] arginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0761225 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAC ATATTGAATC TTTACTAGAA CAAACCATCG AATCCTTCAA ACAGCAAGGA
ATTGTGCCGG CTGATTTTCA AGCTCGCATT CAGGTCGATC GCACTAAAGA TAAAAGTCAT
GGTGACTTAG CGACTAACCT TGCAATGATG CTGACCAAAG TAGCTAAAAA GAACCCACGC
GAATTAGCAC AGCTAATTAT TGATACCTTG CCAGCATCAT CTTATGTGGC CAAAGTAGAA
ATTGCCGGTC CGGGTTTTAT TAACTTTTTC ATTGATGACA ATGCATTAGC TAATCAACTA
CAACAAGCGC TGACCAGCGA CCATTTAGGG GTGGCTTTAC CGACTAAGCA AACCATCGTT
GTCGACTATT CTTCGCCAAA CTTAGCCAAA GAAATGCACG TAGGCCACTT ACGCTCAACC
ATCATTGGTG ACAGCGTCGT GCGCGCACTC GAGTATTTAG GCCATAACGT CATTCGCCAA
AACCACGTCG GCGATTGGGG CACTCAGTTT GGTATGCTAC TGGCGTTAAT GGAAGAGTTA
CGCGCAGCCA ATGGCGAACA AGCCAAAATG GAATTGTCTG ACTTAGAAAG TTTTTATCGT
GCGGCTAAAG TACGTTTTGA TGAGTCTACT GAATTTGCTA CTCGTGCCCG TCAACTTGTC
GTCGCATTAC AATCAGGTGA TGAATACTGC AATAAGCTAT GGCGCGAATT TAACGACATC
TCTTTAAGCC ATTGTCATGA TGTATATAAG CGTTTAGGCG TTAGCTTAAC CCGCGCAGAT
GTTCACGGCG AAAGTGCCTA CAATGCCGAC TTAGCCCAAG TAGTTAAAGA TTTAGACGCC
CAAGGCCTGT TAAGCGAAAG CAATGGCGCT AAAGTGGTAT TCCAAGAAGC ATTTCGTAAT
AAAGAAGGCG AGCCTTTACC GGTTATTATT CAAAAAGCAG ATGGTGGCTA TTTATACGCA
ACCTCAGATC TTGCTGCTAT GCGTTACCGC TCAAACGTAC TAAAAGCCGA CCGCGCCATG
TACTTTGTCG ATTTACGTCA AGCGCTGCAC TTCCAACAAG TGTTTAGCCT TGCCAAACTC
GCTAAATTTG TTCGCCCTGA AATGTCGTTA GAGCACACAG GCTTTGGCAC CATGAATGGT
GAAGATGGTC GTCCATTTAA AACCCGTTCA GGCGGAGTAG TTAAATTAGT TGATTTACTG
GATGAAGCCG ATGTTCGCGC ACTTGAGCTG GTTCGCAGTA AAAACCCAGA TATGGATGAA
GCAACCCTCA CTGAAATTGC TCGCGTAGTG GGTATCAGCT CAGTTAAGTA TGCCGATCTG
TCCAAGAACC GTACCAGTGA TTATATTTTT AGTTTTGAGC AAATGCTTAG TTTTGAAGGT
AATACAGCAC CTTATCTACT ATATGCCTAC ACCCGAGTAG CCGGTATTTT TAAACGTGCA
ACGGATATTG ATCTTAGCCA AGCTAAGATT GTGCTTGAGC ATGAAAAAGA AAAAGACTTA
GGTACTAAAC TGGCGCAATT TGGTGAAGTG TTAACTCGCA TGACAGACAA AGGCTTGCCG
CATGTATTAT GTGGTTACCT TTATGAACTA GCGAGTGAGT TTTCGAGTTT CTATGAAGCT
TGCCCAGTGC TTGCTGCCGA AACTGAAGCG CAAAAGCAAA GCCGTTTATT GCTTGCACAA
TTAACCGCTA AAACCTTAAA AACGGGCTTG TCGCTGCTTG GCATTGAAAC CCTAGAGCGG
ATGTAA
|
|---|
| Protein sequence | MKSHIESLLE QTIESFKQQG IVPADFQARI QVDRTKDKSH GDLATNLAMM LTKVAKKNPR
ELAQLIIDTL PASSYVAKVE IAGPGFINFF IDDNALANQL QQALTSDHLG VALPTKQTIV
VDYSSPNLAK EMHVGHLRST IIGDSVVRAL EYLGHNVIRQ NHVGDWGTQF GMLLALMEEL
RAANGEQAKM ELSDLESFYR AAKVRFDEST EFATRARQLV VALQSGDEYC NKLWREFNDI
SLSHCHDVYK RLGVSLTRAD VHGESAYNAD LAQVVKDLDA QGLLSESNGA KVVFQEAFRN
KEGEPLPVII QKADGGYLYA TSDLAAMRYR SNVLKADRAM YFVDLRQALH FQQVFSLAKL
AKFVRPEMSL EHTGFGTMNG EDGRPFKTRS GGVVKLVDLL DEADVRALEL VRSKNPDMDE
ATLTEIARVV GISSVKYADL SKNRTSDYIF SFEQMLSFEG NTAPYLLYAY TRVAGIFKRA
TDIDLSQAKI VLEHEKEKDL GTKLAQFGEV LTRMTDKGLP HVLCGYLYEL ASEFSSFYEA
CPVLAAETEA QKQSRLLLAQ LTAKTLKTGL SLLGIETLER M
|
|---|
| |