| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3750 |
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| Symbol | |
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| ID | 4280643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4457549 |
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| End bp | 4458493 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638136563 |
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| Product | MSHA biogenesis protein MshM |
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| Protein accession | YP_752416 |
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| Protein GI | 114564902 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.995764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTGC AGCATTTTGG CTTAAGTCAG TTGCCTTTTA CGCTTACCCC AAATACAGGT
TTCTTTTTTG GGTTATCACC GCATGTGGAA GCGTTGCAAG TACTGCAAAC AGCATTACAA
ACAGGCGAAG GTTTTATTAA AGTCACTGGT GAAGTGGGTA CAGGTAAAAC CTTAGTTTGT
CGTAAACTGT TGAATGATTT ACCGACTCAA TATCATTGCG CTTTCTTACC TAATCCCTAT
TTGAATCCTA AAGAGTTACG CTTGGCTGTA GCGGGCGAAC TCGGTTTAGC ATTGCCGAAC
AAATTAGATC AACAACAACT GACAAGGCTG ATACATGAGC GTTTGTTAGC GTTAAATCAT
CAAGGCTTTC ATGTGGTGTT AGTGTTAGAT GAAGCGCAAT CGCTACCAGA TGAAAGTATT
GAGGCGTTAA GGTTATTTAC CAATTTAGAA ACCGAAAGTC GTAAATTATT GCAAGTGGTG
TTGTTTGGCC AACCAGAATT AGATCAACGT TTGGCACAAC CTAAGTTTAG ACAGTTAAGA
CAACGTATTA CCTTCAGTTA TGACTTACGT CCGTTAACAT GGGATGAAAT ACAAGCTTAT
ATTCATTACC GCCTTGCTGT TGCGGGTTAT CAAGGGCCTG AGTTGTTTTG TACCGCGGAT
ATTAAACGCA TTGCCAAAGC CGCTCGAGGC ATCCCGCGTT TGGTGAATAT ATTGGCGCAT
AAGAGCTTAT TACTATGTTA TGGCCAAGGT AAAAAAAAGG TGACCTCTCA ACATTGTCTG
GCTGCAATAA CGGATACAGA AGATATTAAT TTACAACATA AAGTAGGGTT TTCTCGTGTC
AGCATACTGA TAATTATGTT GCTTGTAACA GTGATGGTGG TTATTGGGTT CAATGGTGAT
AATTGTTGTG GTGAATGGAT GACACAAATA GGCGAGATTA AATGA
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| Protein sequence | MYLQHFGLSQ LPFTLTPNTG FFFGLSPHVE ALQVLQTALQ TGEGFIKVTG EVGTGKTLVC
RKLLNDLPTQ YHCAFLPNPY LNPKELRLAV AGELGLALPN KLDQQQLTRL IHERLLALNH
QGFHVVLVLD EAQSLPDESI EALRLFTNLE TESRKLLQVV LFGQPELDQR LAQPKFRQLR
QRITFSYDLR PLTWDEIQAY IHYRLAVAGY QGPELFCTAD IKRIAKAARG IPRLVNILAH
KSLLLCYGQG KKKVTSQHCL AAITDTEDIN LQHKVGFSRV SILIIMLLVT VMVVIGFNGD
NCCGEWMTQI GEIK
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