| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3749 |
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| Symbol | |
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| ID | 4280642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4456257 |
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| End bp | 4457534 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136562 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_752415 |
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| Protein GI | 114564901 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.541109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAG ATTTAGAGCA GCATCAGCAA CCCGGAACAG ACAAACCACC GGTGCAACCC
GCGGGTGAAT TTGTGCGACC TCAAATTCAG TATCAATCCG TTGCTAAATC TCGCTCACCA
TTGATTAGCC TTATTGTTGT TGCCGTACTA TTGATCCCTA CATTGTGGTT TGGTGTATCT
ATGTACCGCC AAGCCAATAT TCAAATGGCC AATCAGCCAA CAGATAGCAA TGCATCGGTT
ACCGAAGATA CTCAGTCATC GCTGGCAAGT CAGCCACAAG GTAATGGTGT TGCTGTTGAT
CATAAGTCTA CTCAAATCTC AACTGAAGTA CTAACCCAAG CACCAGCTCA AACGCTAAAT
CAAGTACCTA TTCAAGCGAG CACGCCAGAA ATCACTGCTG AGGTTATTGA ACCAACGGAT
CGCATATCTG AGCTTGAACT ATCCGAAGTG AGCACTGCAT CAGTCGTTAA TAACGAAACC
GTCAACACAC AAGCAGTACT AGCTTCAACC GTAGACGCAG AGAAGCCCAA TATTTCGGTA
GATCATAATT CACAGAATAT GGCTTCACTG CTGAATACTG AACTCACTCA AGATCAAATC
ACAGCGCAAA CATCTCGCTT CTTACCCGCA GAAGTACCCG CAAAAATCCC TGCTGCAGCA
AAAACTGTTG ATATGAGCGT TAACGAAGTG GTGCTTTCCA AAACGCAAAT GGCGCAGCTG
CAATATCGCA AAGCGATGGA TGCTGAGCAA GCGCAACGTC TGGACGATGC GGCGGGTTAC
TATTTAGAAG CCATTATTTT ACAACCGAGT TTACATAAAG CTCGTAAGCA ATTAGTCGAA
ATTTATTTTG CGCAAAATAA TCCAACAACT GCGATGAGAT TACTCGAGAG TGGGATCAGT
ATGTTTCCGC AACAGTGGGA GTTTTATGTG ATTTTGTCGC AAATTCAAAC CGCAATTAAA
GCTTATGATG AAGCCTTAAT AACGGTGGCG ATGATCCCAG ATAGCTCATC GTGGGCTCGT
GATAAGTGGA TCGCACAAAC GGATTTGGCA CAAAACTCTA AAAACTTTGC TTTAGCTGAG
GAAGCTTACC GAAACTTATT GGTATCTGAG TCGACTCAAT CTCGCTGGTG GATGGGGCTA
GGTTATGCGC TCGATTCACA ACAAAAATAT CCACAAGCCG CGCAAGCTTA CCGATCGGCA
TTAAGCTATG AAGGGTTATC AACTTCAGCC ATGACATTTA TTGAACAACG TTTAGATCAG
CTAGGAGAAA ACCGATGA
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| Protein sequence | MLKDLEQHQQ PGTDKPPVQP AGEFVRPQIQ YQSVAKSRSP LISLIVVAVL LIPTLWFGVS
MYRQANIQMA NQPTDSNASV TEDTQSSLAS QPQGNGVAVD HKSTQISTEV LTQAPAQTLN
QVPIQASTPE ITAEVIEPTD RISELELSEV STASVVNNET VNTQAVLAST VDAEKPNISV
DHNSQNMASL LNTELTQDQI TAQTSRFLPA EVPAKIPAAA KTVDMSVNEV VLSKTQMAQL
QYRKAMDAEQ AQRLDDAAGY YLEAIILQPS LHKARKQLVE IYFAQNNPTT AMRLLESGIS
MFPQQWEFYV ILSQIQTAIK AYDEALITVA MIPDSSSWAR DKWIAQTDLA QNSKNFALAE
EAYRNLLVSE STQSRWWMGL GYALDSQQKY PQAAQAYRSA LSYEGLSTSA MTFIEQRLDQ
LGENR
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