| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3747 |
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| Symbol | |
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| ID | 4280640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4453283 |
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| End bp | 4454497 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136560 |
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| Product | type II secretion system protein |
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| Protein accession | YP_752413 |
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| Protein GI | 114564899 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAATAT ATCAATATCG AGGACGTAAT TCACAAGGGC AGGCGGTCAG TGCGCAGCTT
GAGTCTGCTA ATGAAAGTTC TGCGGCAGAT GCATTGCTTT CTCGTGGGAT TATTCCGCTA
GAATTACGTG AAGTGAAAAC GAAGCAATCT TTTTCGATGA GCTTATTTCA AGGCAAAGTG
TCGCTGGAAG AATTGCAAAT TTTTAGTCGA CAAATGTATT CGTTAACGCG TTCAGGTATT
CCTATTTTAA GAGCTATAGC TGGCTTATCT GAAACAACTC ATTCCGATCG AATGAAAAAA
GCCTTAGATG ATATTTCTGA ACAGCTGACG TCGGGAAGAC CGTTATCTTC GGCAATGAAT
CAACATCCAG ATATATTTGA TTCGTTGTTT GTATCGATGA TCCATGTTGG TGAGAACACC
GGTAAGTTGG AAGATGCCTT TATCCAGTTG TCTGGTTATA TCGAGCGAGA ACAAGAAACT
CGTCGACGGA TTAAAGCTGC AATGCGTTAT CCGATGTTTG TTTTGATTGC CATTACCATA
GCGATGGTTA TTTTGAATAT TATGGTGATC CCAAAATTTG CTGATATGTT CTCTCGTTTT
GGCGCTGAAT TACCTTGGGC GACAAAAATA TTAATCGGCA CGTCTAATTT GTTTGTTAAT
TTTTGGCCTC ATATGATTGT GCTATCAATC GGCATCATAG TCGGGATTCG ATATTGGCAT
CACTCTGAAA AAGGTGAGAA GCAATGGGAT TTATGGAAGC TGCACATACC TGTTATTGGA
TCTATTATTG AGCGCTCAAC CTTGTCGCGT TACTGTCGCT GTTTTTCGAT GATGCTCAGC
GCGGGAGTTC CGATGACCCA AGCACTCAGT TTGGTAGCAG ATGCGGTCGA TAACGCATAT
ATGCATGACA AAATAGTCGG TATGCGCCGG GGTATTGAAT CAGGTGAGTC AATGCTAAGG
GTATCAAATA GCAGCCAACT GTTTACCCCA TTGGTATTGC AAATGGTTGC TGTGGGTGAA
GAAACCGGTC AAATAGATCA GCTGCTCAAT GATGCCGCTG ATTTTTATGA AGGCGAGGTT
GATTACGATT TAAAAAATCT CACCGCAAAA CTCGAACCTA TTTTAATCGC ATTTGTTGCT
GGCATTGTAT TGATATTGGC ACTGGGTATT TATCTTCCTA TGTGGGATAT GCTGAATGTG
GTAAAAGGCG GTTAG
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| Protein sequence | MPIYQYRGRN SQGQAVSAQL ESANESSAAD ALLSRGIIPL ELREVKTKQS FSMSLFQGKV
SLEELQIFSR QMYSLTRSGI PILRAIAGLS ETTHSDRMKK ALDDISEQLT SGRPLSSAMN
QHPDIFDSLF VSMIHVGENT GKLEDAFIQL SGYIEREQET RRRIKAAMRY PMFVLIAITI
AMVILNIMVI PKFADMFSRF GAELPWATKI LIGTSNLFVN FWPHMIVLSI GIIVGIRYWH
HSEKGEKQWD LWKLHIPVIG SIIERSTLSR YCRCFSMMLS AGVPMTQALS LVADAVDNAY
MHDKIVGMRR GIESGESMLR VSNSSQLFTP LVLQMVAVGE ETGQIDQLLN DAADFYEGEV
DYDLKNLTAK LEPILIAFVA GIVLILALGI YLPMWDMLNV VKGG
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