| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3742 |
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| Symbol | |
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| ID | 4280635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4450112 |
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| End bp | 4450648 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136555 |
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| Product | methylation site containing protein |
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| Protein accession | YP_752408 |
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| Protein GI | 114564894 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.247537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCGTA ACATTCAATT TCATCGTTTA TCACAACCTA CTCGTGGTTT TACTTTAATC
GAACTCGTCA TTGGTATGAT GGTGATCGGC ATTGCGATAG TGATGCTCAC TAGCATGCTA
TTTCCCCAAG CAGATAGAGC TGCATCGACA TTACAAAGAG TACGTTCAGC AGAATTAGCT
CATTCGGTAA TGAATGAGAT CTGGGGTAAA CGATATGATC AAAATACTAA TCCTAATGGT
GGTATTCCGG CGTGTAATGC ACCTACAGGT ATCGCTTGTA CAACAGAGTC AGCATTAGGC
CTAGACGGTG AAAGCCGAGA CACGTTCAAC GACGTTGATG ATTATCATGG CTTGGATGAA
ACCGATAACA TGCTCGACTC TAGCCAAACT TATACCCAAG CTTATCCTCG CTATCAGTTG
CAAGTGTCAG TTGAGTATCT TGACGCTGCG ACGAAGGCAC AAAAATTAAT TACCGTAGCA
GTAACAACGC CTGCCAATGA AGAGATCACT TACCAAGCGG TAAGGAGTAA CTACTAA
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| Protein sequence | MLRNIQFHRL SQPTRGFTLI ELVIGMMVIG IAIVMLTSML FPQADRAAST LQRVRSAELA
HSVMNEIWGK RYDQNTNPNG GIPACNAPTG IACTTESALG LDGESRDTFN DVDDYHGLDE
TDNMLDSSQT YTQAYPRYQL QVSVEYLDAA TKAQKLITVA VTTPANEEIT YQAVRSNY
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