| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3733 |
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| Symbol | |
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| ID | 4280626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4434948 |
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| End bp | 4439279 |
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| Gene Length | 4332 bp |
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| Protein Length | 1443 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136546 |
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| Product | hypothetical protein |
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| Protein accession | YP_752399 |
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| Protein GI | 114564885 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGACAA CTCAGGCAGT AACTATCAAC AGATTATGTT GGCAAATTTT GGCTATCGCG
CTGGTGCTTT TTGCACTGGT AGTGAGCCTT ATTCGTGGTT TATTGCCTCA TATTCCTGAA
GTCCGTACTG AGTTAATTCA TTATCTTGAA AGCGAATACC AACTGCATGT GCAGATGGAT
AAACTGAGTG CAGAGTGGCA AGCTTTTGGG CCAGCACTTA CCGTTAATAA TTTAGTCTTA
CCGCCACAAG ATAATCTACC GATTACCGTT ATTAGCGAAA ATGTGCATAT CAAACTCGAT
TTTTGGCAGT CGCTTTTCAC CTTAAGCCCA CAGATTGAAA CTGTGGTATT TGATGGCGTT
AAAGTGGCGT TAAACCTTGA TGAGTTAACA GCTAGTGATG GCCAGCCTAC AGTGGGCGAT
AAAGCTAATC TTGATTGGTT ATATGGTTTG TTATTAGAAC AGCTGGGGCA TTTTTCAATT
ACCGACGCGT CCTTACAACT GGTGAGTAAG CAACATGCTT ATCAACCAAT TTTTATCGAT
AATCTGCTAT GGCAAAACAC CGCTAATCGT CACCAAGCAC AAGGTATGAT CCACGTCGAT
CAACTTAAGT CGCAGCAAGA GCAATTAACA TTACGCATTG ACCTTACTGG TGATGGTTAT
CAACCCGATA CTGTAGCAGG CCAGCTTTAT GTTACCGCAG ACTCATTAGA CTTAGGTGAA
TGGGCTTCTA GGCAGCATAC CGCTCAAAAA AACACTGATA ATATTGAATT TCAAGGTGTG
ATAAACCTCG ATGCGTGGAT GACATTCGCC AATCGTCAAA TTCGTGATGG TATATTGGTT
TTTAAACCGA GTTGGCTACA ATGGCGCGAT GCAGACACTC AGCAAAAGTT TGCTATTAAC
TCTGGTTCAT TGCAATGGAC CCCACAAACC GATGGCTGGA AAATCGACAG TCACGATTTA
GATTTATCAA CTAACGATCA AACTTGGCCA TCATTGACGT TGGCCATAGG TACTCGCGAG
GGGGATTTTT TTGGTTATGC TAACCAGATT GTTCCTGCAA ACTTAACCCC AATGTTGCCG
TTAGTGCCCG ATTTGGGTAA GCAGCAAGTG AACATTTGGC AACAACTCAA TCCTCAAGGG
CTAATTGGGC CGATGAGGCT GTATAAATCG GCCGACAAAC CTATTATCGC CAAAGTCGAG
TTACAGCAGT TACAGTGGCA ACCTTATCAA TCAATACCTG GCATTAGCCC TGTTGATGCT
CAATTAACCT GGGCCAATAA TCAACTTGAA TTTGCATTAC CAGAGCAGGA ATATTCGCTC
GATTTTAGCG GTGATTTTAG TCAACCAATT GCAATGCGCG GCAGCCCAAT TACGGGGCGT
TATAATCTCG GCGAGCAACG TTTAACAGTA CCCAACATTG AATTTATTAA TGATGATATT
GCCCTGCAAG CCGGTTTGAA TCTTGAGTTT TCCCAACAAA CACATATGGG CTTAGCGGCC
CATGTCACTA TAAATGATGT TTCCCATCTT GGGCGTTATT TTCCATTAAT GGCGATGAGC
CCTAATTTAA CCACCTACCT TAATGATGGT TTAGTGGCAG GGCAGATTAA CGATGCGCAA
GTTGTTTGGC ATGGTGCATT AGGCGATTAC CCTTATCAAG ACAGCAGTGG CGTATTTCAA
GCCGACTTTA CCCTTGATAA AGGCATCTTT AAATTCCAAC CAGATTGGCC TGCCGTTAGT
TCGCTAACGC TTTCTGCATT GTTTGAAAAT GACATGATGG ATTTGCATAT TGACCAGGGC
AAACTCGATA ACGTGGTGGT GGATGGTGCA CGAGTTTCTA TTCCACATCT TGGTAAAGAA
TCTTTATTAA GAGTTGAAGC TGATATCACT ACCGATGCGC AAGCAGCCAC TAAGGTGATT
AATGCTTCTT CACTGCAGGA TTCTGTCGGG GCAACGTTAG ACGTGGTGCA GATCCAAAAG
CAAATTAATA CCACATTAGA TCTTTCCATT CCCTTATATG AAGGGGGTGA ACAATTAATT
AAAGGCCAAG TTACCCTTAA TAATAATCCA GTGTTTATTA GCACACCCGG CTTAGATTTA
CAGGGTGTAT CTGGGCAAGT GAGCTTTGTG AATCAATTGA TTGAAGGTAA AAATATTAAG
GCTCGATTAT TTCAGCAACC GTTAACGTTT AGCGTAAAAA CCGGAAAATA CAACAGCAAT
TTAGCATTGA ATGTCGATAT GCGTGGTAAA TGGGATCTTG ATGCTCTGCC TGCCAGTTTA
GATAACCCAC TGACAGAAAC GTATTATGGA CAACTAGACT GGAATGGCGG GTTAACCATG
ATTTTTGACC CAAGTGGTTA TAGTTTACAA GTCTCCGCTA ATTCTGATCT TATCGGTACG
TCATTGGATT TACCGATGCC TTATCAAAAA TCGGCAGACG AGCCGAGAAA ACTGAGCGCA
GATCTTATTG GCGATAACAA ACAATCATCA TTGAGCATTA AACTGGGTAA TGATGTGGAG
TTTTGGGGCG GATTTAATGC TGATAGTGGC AGTCAGCTTG CCTTTTATGA TGTCATGATT
GGTCGTCACT TTAGACTAGG TGATAACTTA AATAAGCAAC AAGGGCATCT ACATTTAGAT
ATGCCAAAAG TGGATTTAGC GCAATGGCTT CCGCTTATTA ATCGCTTTAG TGCTACCGCA
GAACCTGAAG TGATCACCTC ATCGGTACGC GACCGTATAT TATCGACTGC AGAGCTACCT
GGTGCTGCGG CACAACAAAA TACCACCTCA TCGATTGACG CTAAAGCACC TGCATTTCCC
ACATTAGCCG GTATTCATGC CAACATCGCC CAATTAAATG TATTGGGACA ATCATTTGAT
AAACTGCATT TTGATGCTCA ACCCACTGAA CATGTGTGGC GCGTTGATGC TGATTCACAA
CAGTTTGAAG GGCGTATCGA TTTTTATCCT AACTGGCGCG ATCAAGGCAT CAAAGTGGTT
GCGAAAAAGC TGCATTTATC CCCAGTCGTG AGTGGCACTG AAACCGTTGC GTTAGCGCCA
ACTTCGATGC TAGAACATCT GCCTACTTTA GCCGTAGATG TGGATGACTT TAGCGTTAAT
GATTTATCTC TAGGTCACCT AGTGTTGCAA GGTTTACCAC ATAAGCAAGG CTACCAATTT
CAAACTATTT CCATCACAAA ACCGACGGTA GCATTACAGG CTAATGGTTT ATGGTCTGTT
GAAAATGATA TCGATAAAAC CCTATTTGAG GTTAATTTAC AGGCCGACAA GTTTGATGAC
TTATCGACCA TGTTAAAAAT TAATCCTGGG CTGCAGGATG CACCACTGGA TCTCTCCGGC
CAGTTATCTT GGCAAGGCAC GCCTTACCAC TTCACCCTCG ACACCTTAAA TGGCCAACTT
AAGTTTGATT TAGGCAAAGG TCATTTATCG GAGATTAGTG ATAAAGGCGC TCGAGTGTTT
TCGTTATTCA GTTTAGATTC GTTATTACGT AAATTATCGT TAGATTTTTC GGATGTGTTC
GGCGAAGGTT TATATTTCAA TACCTTTAAC GGTAACCTAA CGATTGATAA TGGTGTGGTT
AAAACCACCG ATTCTGAAAT GGATGCCATT GCTGGTAATA TGCGAGTAAG AGGTTATACC
GACTTAACCA CCCAAAGCTT AAATTATGAT ATCCGTTTTG TGCCGCAACT TGCCTCAAGT
GTGCCAACCG TGGTGTTATT GAGTACCAGT GCATGGACTT TGGGTTTAGG CGCGTTTGCT
CTTACGAAAG TGTTAGAGCC GGTTATTGAA ATTATCTCTG AAATTCGATT TCGAGTCACC
GGTACCATGG ACAATCCGCA ACTAGAAGAG CTTGAGCGTA AGAGTAAAGA AATCGAAATA
CCTAAGGCAA TTTTGCCGCA GGCGGATGAG ACCAGTGTAG AGACGACGAT TGGAACTAAA
GCCAAAACTA ACGTAGATAC TAAAGCTAAC GTAGATACTA AAGCTAACGT AGAAACTAAA
GCTAACATAG ACACTAAAGC AGCAACTAAC ATTGATGCAG ATGTTCAGCG TGGCAATCAC
AGCCGTGAAT CAGAAGATAA ATCGTTACCA AACTCGCCTT CTGACCTGCT CATGCCAGTT
ATCGATAATC CATCTGATGT GAATCAACCA TCAGCCAAGA ACGCTAAAGT AGAGCCAATG
AGTAAGTCTT TGGCCAAGCC TGCAACTAAT GTCGTTATGC TACAAGGAGT GAGAGATGCA
AATAAGCTTA TTACAATGTC AAAGCAGTCG CGATGTCAAA GCCAATCTCG CGTTTGTCGA
CTCACAGCTT AA
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| Protein sequence | MSTTQAVTIN RLCWQILAIA LVLFALVVSL IRGLLPHIPE VRTELIHYLE SEYQLHVQMD
KLSAEWQAFG PALTVNNLVL PPQDNLPITV ISENVHIKLD FWQSLFTLSP QIETVVFDGV
KVALNLDELT ASDGQPTVGD KANLDWLYGL LLEQLGHFSI TDASLQLVSK QHAYQPIFID
NLLWQNTANR HQAQGMIHVD QLKSQQEQLT LRIDLTGDGY QPDTVAGQLY VTADSLDLGE
WASRQHTAQK NTDNIEFQGV INLDAWMTFA NRQIRDGILV FKPSWLQWRD ADTQQKFAIN
SGSLQWTPQT DGWKIDSHDL DLSTNDQTWP SLTLAIGTRE GDFFGYANQI VPANLTPMLP
LVPDLGKQQV NIWQQLNPQG LIGPMRLYKS ADKPIIAKVE LQQLQWQPYQ SIPGISPVDA
QLTWANNQLE FALPEQEYSL DFSGDFSQPI AMRGSPITGR YNLGEQRLTV PNIEFINDDI
ALQAGLNLEF SQQTHMGLAA HVTINDVSHL GRYFPLMAMS PNLTTYLNDG LVAGQINDAQ
VVWHGALGDY PYQDSSGVFQ ADFTLDKGIF KFQPDWPAVS SLTLSALFEN DMMDLHIDQG
KLDNVVVDGA RVSIPHLGKE SLLRVEADIT TDAQAATKVI NASSLQDSVG ATLDVVQIQK
QINTTLDLSI PLYEGGEQLI KGQVTLNNNP VFISTPGLDL QGVSGQVSFV NQLIEGKNIK
ARLFQQPLTF SVKTGKYNSN LALNVDMRGK WDLDALPASL DNPLTETYYG QLDWNGGLTM
IFDPSGYSLQ VSANSDLIGT SLDLPMPYQK SADEPRKLSA DLIGDNKQSS LSIKLGNDVE
FWGGFNADSG SQLAFYDVMI GRHFRLGDNL NKQQGHLHLD MPKVDLAQWL PLINRFSATA
EPEVITSSVR DRILSTAELP GAAAQQNTTS SIDAKAPAFP TLAGIHANIA QLNVLGQSFD
KLHFDAQPTE HVWRVDADSQ QFEGRIDFYP NWRDQGIKVV AKKLHLSPVV SGTETVALAP
TSMLEHLPTL AVDVDDFSVN DLSLGHLVLQ GLPHKQGYQF QTISITKPTV ALQANGLWSV
ENDIDKTLFE VNLQADKFDD LSTMLKINPG LQDAPLDLSG QLSWQGTPYH FTLDTLNGQL
KFDLGKGHLS EISDKGARVF SLFSLDSLLR KLSLDFSDVF GEGLYFNTFN GNLTIDNGVV
KTTDSEMDAI AGNMRVRGYT DLTTQSLNYD IRFVPQLASS VPTVVLLSTS AWTLGLGAFA
LTKVLEPVIE IISEIRFRVT GTMDNPQLEE LERKSKEIEI PKAILPQADE TSVETTIGTK
AKTNVDTKAN VDTKANVETK ANIDTKAATN IDADVQRGNH SRESEDKSLP NSPSDLLMPV
IDNPSDVNQP SAKNAKVEPM SKSLAKPATN VVMLQGVRDA NKLITMSKQS RCQSQSRVCR
LTA
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