Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3731 |
Symbol | |
ID | 4280624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4432650 |
End bp | 4434098 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638136544 |
Product | peptidase U62, modulator of DNA gyrase |
Protein accession | YP_752397 |
Protein GI | 114564883 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATTTT TAACCCAAGT AGAGCAGAGT TTATTGCAAG ATGGATTAAC CTTAGATGGA CTGCAAGGTT ACTTAAATAC CATTCATCAA CACAATATCG ATTTTTCAGA CCTGTATTTC CAAGCTTGTC GCCATGAGTC TTGGGTATTA GAAGATGGCA TTGTAAAAGA AGGCAGCTTT CATATTGAGC GCGGAGTCGG TGTGCGTGCC ATTACCGGTG AAAAAACTGG TTTTGCTTAT GCTGACGAAA TTACCCCAGC AGCTTTAGAT GCAGCAGCAA AAGCGGCTCG CGGTATCGCC AGTGCTGGTG AGCAACATAA AGTACAAGCT TTTAAGCGCC AAACAGCCCA TAAATTGTAT GACAGTGCCG ATCCCATTGC TGCTATGGAC GAAGTAAAGA AAATCGATTT GTTAAAGCAA GCTGATGCTT ATATTCGTAG CCTCGACAGC CGTATTATTC AGGTAGTCGT GAGTTTATCT GGCGTACATG AAGAAATATT GATTGCCGCC AGTGACGGAA CATTAGCGGC TGATATTCGT CCATTAGTGC GCTTTAACTG TAGTGTTATC TTAGAAGACA AAGGTAAGCG CGAACGTGGT AGTGCTGGTG GTGGCGGTCG TCACGATTAC AGCGCTTTTT TAGCCACCGA TGACGCTGGC TTACCGCAGA GTTTTGAGTT TGCCCGCGAA GCAGTGCGCC AAGCACAAGT TAATGTCAAT GCTATTGATG CACCCGCCGG TGAAATGACC GTGGTGTTAG GTAATGGTTG GCCTGGTGTT TTACTGCATG AAGCTGTTGG CCATGGTTTA GAAGGTGACT TTAACCGTAA AGGCAGCAGT GCATTTAGCG GTAAAATGGG CCAGCAAGTG GCGTCGACTT TAGTGACCAT CGTGGATGAC GGTACCCTGG AAAATCGTCG CGGTTCATTA AGCATCGATG ATGAAGGCGT GCCAAGTCAA AAAACTACCT TAATTGAGAA CGGTATTTTA AAAGGTTACA TGCAAGATAA GTTAAATGCC CGCTTAATGG GGCAAGAACC TACAGGCAAC GGACGCCGCG AATCTTATGC ACATTTACCT ATGCCGCGTA TGACCAATAC TTATATGAAT GCTGGTGAGT CAAACCCAGC TGACATTATT AAGTCAGTTA AAAAAGGTAT CTACGCACCT AACTTTGGTG GCGGACAAGT CGATATTACC TCTGGTAAGT TTGTGTTCTC AGCTTCCGAA GCCTATTTGA TTGAAGACGG TGAAGTGACT CAGGCGATTA AAGGCGCGAC CTTAATTGGC AATGGCCCCG AAGCCATGGG ACTCATTTCA ATGGTCGGTA ATGACTTGGC CTTAGATAAA GGCGTTGGCG TGTGCGGTAA AGACGGGCAA AGCGTGCCTG TTGGCGTTGG TCAGCCTACT CTAAAAATTG ATCGTCTAAC GGTTGGCGGC ACTGCTTAA
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Protein sequence | MPFLTQVEQS LLQDGLTLDG LQGYLNTIHQ HNIDFSDLYF QACRHESWVL EDGIVKEGSF HIERGVGVRA ITGEKTGFAY ADEITPAALD AAAKAARGIA SAGEQHKVQA FKRQTAHKLY DSADPIAAMD EVKKIDLLKQ ADAYIRSLDS RIIQVVVSLS GVHEEILIAA SDGTLAADIR PLVRFNCSVI LEDKGKRERG SAGGGGRHDY SAFLATDDAG LPQSFEFARE AVRQAQVNVN AIDAPAGEMT VVLGNGWPGV LLHEAVGHGL EGDFNRKGSS AFSGKMGQQV ASTLVTIVDD GTLENRRGSL SIDDEGVPSQ KTTLIENGIL KGYMQDKLNA RLMGQEPTGN GRRESYAHLP MPRMTNTYMN AGESNPADII KSVKKGIYAP NFGGGQVDIT SGKFVFSASE AYLIEDGEVT QAIKGATLIG NGPEAMGLIS MVGNDLALDK GVGVCGKDGQ SVPVGVGQPT LKIDRLTVGG TA
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