| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3729 |
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| Symbol | |
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| ID | 4280622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4430054 |
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| End bp | 4431043 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638136542 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_752395 |
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| Protein GI | 114564881 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGCTA ACAAGATCAT CGCGGTGGTC GCATTCGTGC TGCTTATATT ATTGTTAGGA
TACGGCGTAA AGCTGGCTTT TACGCCTCAA CCGACAGTGT TACAAGGGCA AATCGAAGCT
CGTGAATATA ATATCTCGTC TAAAGTTCCG GGGCGAGTTG AGCAAGTTTT AGTTCGCAAA
GGCGATCAAG TCGATGTGGA TGATATTTTG TTTGCTATCA GCAGCCCAGA ATTAGATGCC
AAGCTACTAC AGGCTCAAGG CGGTCTTGAA GCTGCAACCG CTATGCAACA ACAAGCTAAT
AACGGTGCAA GGCAGCAACA AGTTACCGCG GCTAAAGAGC AATGGTTAAA AGCGAAAGCT
GCGACCGAAC TTGGCCTAAA AACGTATCAA CGAATTGAAA ACTTATTTGA TGAAGGTGTT
GTTGCACGGC AAAAGCGCGA TGAAGCTTAT ACCCAATGGC AAGCCGCTAA ATATAACGAG
CAAGCAGCTT ATGCTATGTA TCAAATGACT AATGAAGGCG CCCGGGTTGA AACTAAAGCC
GCAGCAGCAG GTAAAACTCG TATGGCAGAA GGCGCGGTTA ACGAGGTGAA TGCCATTTTA
GCCGACAGCC AAATGCGCTC ACCTAAAAAA GCTGAGGTGA GTGAAGTATT ATTACAAGCT
GGTGAGCTTG CGCCGAGTGG TTTTCCGGTG GTGAGCATTA TTGATATGAG TGATGCGTGG
GCTGTGTTGC AAGTTCGAGA AGATCAATTG TTGCAATTTA AGCAAGATCA AACCGTCATG
TTAGATATTC CAGCATTACA GCAGCAAGTC GAATTTACCG TGTCACACGT GAGTGTCATG
GGTAACTTTG CTACTTGGCG CTCGACCGAG AGCGGCCACG ACTTTGATAT GCGTACCTTC
GAAGTTGAAC TGACACCTAA GCAAAAGATT GTCGATTTAC GAGTTGGTAT GTCGGTGTTG
TTTCGTGCCG ATAAGCTTGC CGAACATTAA
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| Protein sequence | MRANKIIAVV AFVLLILLLG YGVKLAFTPQ PTVLQGQIEA REYNISSKVP GRVEQVLVRK
GDQVDVDDIL FAISSPELDA KLLQAQGGLE AATAMQQQAN NGARQQQVTA AKEQWLKAKA
ATELGLKTYQ RIENLFDEGV VARQKRDEAY TQWQAAKYNE QAAYAMYQMT NEGARVETKA
AAAGKTRMAE GAVNEVNAIL ADSQMRSPKK AEVSEVLLQA GELAPSGFPV VSIIDMSDAW
AVLQVREDQL LQFKQDQTVM LDIPALQQQV EFTVSHVSVM GNFATWRSTE SGHDFDMRTF
EVELTPKQKI VDLRVGMSVL FRADKLAEH
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