Gene Sfri_3728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3728 
Symbol 
ID4280621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4428869 
End bp4430041 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content45% 
IMG OID638136541 
Producthypothetical protein 
Protein accessionYP_752394 
Protein GI114564880 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCATT TATTCAGGCG TGAATGTAAA GCGTTGTGGC ATTCGCCATG GCAACTGGCT 
TTGGTTAGCT ATATTCCGCT AATTGGCGTG CTCGCACTGT GGTGGTTATT CAGTGCGGGC
TTGCCAAGGC AGCTCCCCGT TGCCGTAGTT GATTTAGATA ACAGTCAAAT TAGCCGCATG
CTAACAAGGC AATTATCGGC TAATGCCGTG ATTGCCCCCC GCTCATTTGC CAATGAAGCC
GCGGCGATTG AAGCTATGCG TCAAGCGCAA GTATACGGGC TAGTTATTTT ACCTTACCAG
CTCAGAAAAG ATTTACTCAC ATCAAAACAA CCCACTATTG ATATTCGCTA TAACAGCCAA
TTTTTGTTAG TGGGAAAGTT ATTATCCAGC CAGCTACAAC TCAGCCTTGC AGAGGGGTTA
ACGCAAATTG GCGAGGTGAG CCTATTACTT AAAGGCGCAA AAAAAGCCAC CGTTGATGTG
AGCTTAACGC CTATTAGTAA CCAAACGACG GCGTTATTTA ACCGAAATAA TAACTATGTT
GGTTTTTTAG TCCCGCCGAT ATTGATTGCA TTATGGCAAT TACTGTCGAT GTTGGTTTTT
GTTAATAGTG TTAATGCTGA GCTTATTCCT CAAGGTGAAC GCTATTATGT AGCCCGAAAC
ATTTGGCCAA AAGTGTGGGT TAAAGTGTTA TTTTATAGTC CGATAATGCT CGTTCATAGT
GGCTTTATTT TAGTGTGGTT ATACCACTAT TTAGCTTTGC CCGTGTCGGG TTCATTATGG
TTATTGCTTT TGGCACAGGC ATTCATGCTC ATGGCATTGT GGTTGTTAGT GTTGGTTATT
TTTATGATTA TGCGTGACAG TGCCCGCACG GTCAGTTTCT GTACCGCATT ATTTGCTCCA
GCATTTGCGT TTATGGGGAT AACCTTCCCG GTAAACGATA TGCCCATATT GGCTAAATGG
TGGCGGTTGG TGATGCCATC GAGTCACTAT ATCGACTCCC ATGTCAGCGT CGTCAGCTAT
GGTGTTGGCT TGCCGCAAGT ATTAACCCAA ATCAGCTCTT ATTGGGGCTT TTTACTGTTA
TTGCCTTTGC TTTATGTGTT GGGGCGTCAG GCGCAGAAAA TACCGCCACA GGGTCAAGTT
AGTCACCCGG TTAACCTGGA GGTCAACCGA TGA
 
Protein sequence
MRHLFRRECK ALWHSPWQLA LVSYIPLIGV LALWWLFSAG LPRQLPVAVV DLDNSQISRM 
LTRQLSANAV IAPRSFANEA AAIEAMRQAQ VYGLVILPYQ LRKDLLTSKQ PTIDIRYNSQ
FLLVGKLLSS QLQLSLAEGL TQIGEVSLLL KGAKKATVDV SLTPISNQTT ALFNRNNNYV
GFLVPPILIA LWQLLSMLVF VNSVNAELIP QGERYYVARN IWPKVWVKVL FYSPIMLVHS
GFILVWLYHY LALPVSGSLW LLLLAQAFML MALWLLVLVI FMIMRDSART VSFCTALFAP
AFAFMGITFP VNDMPILAKW WRLVMPSSHY IDSHVSVVSY GVGLPQVLTQ ISSYWGFLLL
LPLLYVLGRQ AQKIPPQGQV SHPVNLEVNR