| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3723 |
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| Symbol | |
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| ID | 4280616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4422219 |
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| End bp | 4424699 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136536 |
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| Product | Ig domain-containing protein |
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| Protein accession | YP_752389 |
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| Protein GI | 114564875 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00549605 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCTAA AAATGATGAC TCGCACACTA TTGTTATTAT TAACTTCAGT GTTGTTATTT
ACAGGTTGTA ACGGTGCCGC GGACGGCACC GATACTGACA CATCGAATGA TAGTTATAGT
ATTACCGTCA GCTATCAAAA TGTCGTTAAT GGCCAATGTG ATACGAGTAC TGACTCACTG
ATCTTTGATC TTGATAGTAG CTTCTGTGCC GTTGCACACC TTAAGTTAGG TAATGCCAAC
GTCAGTGGCG CACTCATTAC TTTTAGTACC ACCAATGCAG CAATAACGCC TACAACGGTG
TTAACCTTGT CTTCTGGTCT TGCGACAACA GTTGTCACAT CAAGCAGCAC CGACGCCGGC
ACGCTTAGCG TGAGTTACTC TCCAAGTGAT GCTGATGCAG TTAGTGCGAC TCGCAATTAT
CAATTTAAAG AATATGACAC CAATGTTCCT GTCGAAGCAA TTAAATTAAC CGCTTCTATA
AGTGATGCAA CCGGTCCGAT TACTCGCTTT AATATTGATA AAACAGTTCA ACTCAATGCC
TTGCTTACTG ACAGTAATAA TCAAGCTATT GCTAACCAAA TTGTGACATT CAATGCTGGT
AGTGCTTCGT TAGCGCCAGC AACTGCACTA ACAAAATCTT CAGGCATTGC TACGCTCAAC
TATACGCCGT CCGAGGCAGA GTTAGGTGCC AGTCTGTTAA CCGTCACCAC AGAATATCAA
GGTAGTACTC TTACCAGCAG CAGCGCTTTT GAAGTGTTAG CGTCTGACGA TATTGCTACG
AATGGTAATG TTAAGATGGG CTCGTATAAT GCTAATGGTG AGTTTGTTGA AAGTGAATTG
GCGACAACGC TAGTCGCTAC AACCGATGGC AGTTATAACA TTAGCGCCGG TGGCACATTT
GGGATTACAG CTACGTTAGT TACCGAAAAC ACCGATGGCA CATTAACACG CTTGCAAAGT
CCAACCAGCA TCAGCTTTAG TTCTGACTGC TCTACCAATG ACAACGCCAC ACTTGATTCA
CCTGTCACTA GCTTATCAGG CTCCGCTAGC TCAACTTTTT CAGATGTCAG TTGTAGTGGC
AATAGTGAAC GTAATGACAC CATCATTGCG ACAGCAACTG TTAATGGCAG TAGCTTAAAC
GCAAGTTTAC CTTTTACCTT AGCCCGTCAA ACGTTATCTA ATGTGAGCTT TGTGTCAGCT
GACCCAAGCC AAATCCGCAT CAAAGGTTCA GGCGGCACCG GTTCAACTGA ATCATCGTTA
GTGACCTTCT TAGTGACTAG TGCAAATGGC CAACCAGCAG CACAACAAAC GGTTAATTTT
AGCTTAGACA CCAGTGTGGG CGGTTTACAA TTTGCTAATG GTAAAGTGAC GGACAACAGT
ATTACCAATT CCCAGGGATT AGTCAGCGTG CGAGTGCAAG CTGGCACCAT TCCTACCCCA
GTAAGAGTGG TGGCATCAAC CACTGACGCC GACACTAACC AAACCATTAC CAGCCAATCA
GAACAGCTGA CCGTCAATAC CGGTTTGCCA CAACAGCTTG GTTTTAGTAT TTCAAGATCA
AATGGCAACC CTGAAGCGGG CGACTACAAT GGTGAAGAAG TTACCATTAC AGTGTATGCC
TCTGATAGTT TTGCAAACCC TGCACCAGAC GACACTACCA TCAACTTTAC CGCTGAAGGT
GGTCAAATCC AACCATCATG TACCATTGCA AATGGCAGGT GTTCCGTCAT TTGGACATCA
GCATCACCAC GAGTCAGTGA CCATCGCGTA ACAATTATGG CTTATGCGCT AGGGCACGAA
ACCTTCTTCG ATATCAATGG CAACAATGTA TTTGATGATG CTGATGGCGG CGTAGTTAAC
GGCTGTTTAA GTGGTACAAC GTCAGTAGCA TGTAGTGGTA ATGGCATGGA TGTAGAAACT
TACCATGACG GTGGTTTTGT TGACTTGCCT GACGCCTTTA GAGATGACAA CGAATCTCGC
GTCCATGATT CAGGTGAACC TTACTTTAAT ATTCAAGCGA GTAACACATA TCAATTAGCT
GACGGTAAAT TTAACGGCCC ACAATGCCAA GGTACATTAT GTGACAGCAC GGCTATGAGC
ACTTATATCC GTAAAGCATT AGTATTAACA ATGTCAGGCT CTGATGCTAA TTTCGTGGTT
AGCCAAGATG GCAGCTTGAT TAATAATTAC GACACTGATG TTCAGCCTAT TACACTAGAT
GCAACGGCAA AGTTTGATGT GGTACTCACT GATAGCGCCA ATCAGATATT GCCTTCAGGT
ACAATTTTAA CGGTTACTAG CACCGAAGGT GAATTGCAGT TCACTGGTTA TACCGTACCT
AACAAGAGTT CAGCAGGAGG AACATCAACC TCATTTACCT TGAAAAATAA TGGTACACCC
GGCACAAGCC AAGTCACACT GACAGCAACT ACGCCTAAAG GTGTGGTCAC TGAATTGATA
TTTTATGTGA CCTTGTCATA A
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| Protein sequence | MRLKMMTRTL LLLLTSVLLF TGCNGAADGT DTDTSNDSYS ITVSYQNVVN GQCDTSTDSL
IFDLDSSFCA VAHLKLGNAN VSGALITFST TNAAITPTTV LTLSSGLATT VVTSSSTDAG
TLSVSYSPSD ADAVSATRNY QFKEYDTNVP VEAIKLTASI SDATGPITRF NIDKTVQLNA
LLTDSNNQAI ANQIVTFNAG SASLAPATAL TKSSGIATLN YTPSEAELGA SLLTVTTEYQ
GSTLTSSSAF EVLASDDIAT NGNVKMGSYN ANGEFVESEL ATTLVATTDG SYNISAGGTF
GITATLVTEN TDGTLTRLQS PTSISFSSDC STNDNATLDS PVTSLSGSAS STFSDVSCSG
NSERNDTIIA TATVNGSSLN ASLPFTLARQ TLSNVSFVSA DPSQIRIKGS GGTGSTESSL
VTFLVTSANG QPAAQQTVNF SLDTSVGGLQ FANGKVTDNS ITNSQGLVSV RVQAGTIPTP
VRVVASTTDA DTNQTITSQS EQLTVNTGLP QQLGFSISRS NGNPEAGDYN GEEVTITVYA
SDSFANPAPD DTTINFTAEG GQIQPSCTIA NGRCSVIWTS ASPRVSDHRV TIMAYALGHE
TFFDINGNNV FDDADGGVVN GCLSGTTSVA CSGNGMDVET YHDGGFVDLP DAFRDDNESR
VHDSGEPYFN IQASNTYQLA DGKFNGPQCQ GTLCDSTAMS TYIRKALVLT MSGSDANFVV
SQDGSLINNY DTDVQPITLD ATAKFDVVLT DSANQILPSG TILTVTSTEG ELQFTGYTVP
NKSSAGGTST SFTLKNNGTP GTSQVTLTAT TPKGVVTELI FYVTLS
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