Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3722 |
Symbol | |
ID | 4280615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4421638 |
End bp | 4422171 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638136535 |
Product | hypothetical protein |
Protein accession | YP_752388 |
Protein GI | 114564874 |
COG category | [S] Function unknown |
COG ID | [COG3028] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000177503 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTG TTGGCGATTC TGAGCTATTT CAGCAGCCCT ATGATAATGA TGACAACTAT GTCAGCAGAA CAGGCGTTAA AAAAGAAAGT GAGGATGCTC AAGCACTTGG CATGCGTTTA GTGGCCCTGA GCAAAACTCA ATTAGACAAA ATGGGTTTAG ATGAATTTCT ATATGATGCG ATTCTAAAAA CAAAACTGAT TAAACAAAAA ACTGAAGCCT ATCGCCGCCA TTTACAATAC ATTGGTAAAT TAATGCGTGG CTTTGAGCAT GAGCCTATTG AAGCAGCACT GGATAAAGTG TTGAACAAAA ACAATAATGA AGCTGCTCAA ATACAGATTT TTGAAAAAAT GCGTGAGCGT TTATTAGCTA ATGGCGATGA TGAGGTCCAA GTATTACTGG ATTTGCATCC ACAACTTGAT CGTCAAAAAA TGCGCCAACT GATCCGCCAA GCGAATAAAG AACTGGCTAA AGGCCCAGAG TCAAAATCGT CTAAAGAGTT ATATAAGTAT TTAAGATCTG AAATAAAAGA CTAG
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Protein sequence | MKIVGDSELF QQPYDNDDNY VSRTGVKKES EDAQALGMRL VALSKTQLDK MGLDEFLYDA ILKTKLIKQK TEAYRRHLQY IGKLMRGFEH EPIEAALDKV LNKNNNEAAQ IQIFEKMRER LLANGDDEVQ VLLDLHPQLD RQKMRQLIRQ ANKELAKGPE SKSSKELYKY LRSEIKD
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