| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3718 |
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| Symbol | |
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| ID | 4280611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4413770 |
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| End bp | 4416382 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136531 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_752384 |
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| Protein GI | 114564870 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGAC TGACTAAACT AACGGCGGTT TCACTCGCAG TTGCAGCAGC ATTGCCGATA
ATGGCAAATG CAGAAGTGTT AATTAGTGAA TACGTTGAAG GTAGTTCAAA CAACAAAGCG
ATTGAACTGT ATAACAACAG TGACGTTGCA ATTGATTTAA CAGGCTACAA ATTAGTACGT
TATAAAGACG GTGACTCGGC ATCGCTTGAT ATGGTGGAGT TAACTGACAC TATTGCGGCA
AAAAGTGTCA AAGTCATTTT GCACCCAAGT GCAGCGATTA CCTTACCAGC CTCAACCGAC
TCTATGACTG GTAACTTGTA CTTTAATGGT GGTGATGCTG TCGGCCTATT AAAAGACGGT
GTGTTGGTTG ATGTTGTTGG TGAAATTCCA ACGCCAGCAG GTTGGGGGTT CGACACCACA
TTTCAGCGTA AATTAGACTC CTTAACCGCT AGCACCACTT ATGATGCTAG CCAATGGGCC
ACATTAGATA AAGACACCTT TAGTGGTTTG GGCTCGCTTG ACGCCGCTGT TACACCAGAA
CCAAGTACAT TTACTTGTAA CGGTGCAACG CTAACGAATA TTTATGACAT TCAAGGCGCT
GGTGATTCAA GCCCATTAAT TGCCGATGGT AGTTATGAGT CGGCTAATGA AGTGACCGTA
AAAGGCATTG TTACTTCTAG AAGCGACAGT TTATACAAAG GTTTCTTTAT TCAAGACATG
CAAGGTGACA ACTCACCTTA TACTTCAGAC GGCATTTTTG TCTTCTTGAA CGAAGCCGCT
CCAGACACTA TTCAGCCAGG TACTGAAGTG TGTGTGCAAG GTAAAGTAAA CGAGTATTAC
GGCTCGACTC AGATTAACCT TAAAGACGAA CAAAAATTTG AAGTTGGTGC ATTAGGTGAA
GTGCCTGTAG CCAGTGCATT TTATGTTGCA GATGGCGAAA CCCTAACGCA AGCATTAGAG
CGTGTTGAAG GCATGAAAGT GGTATTAGAT GCGGGCAGTG AGATGAAAAT CACCCGTACC
TTTAGCTACG ATTATGACGG ACGTCGTAAC AATATGGTGT TGTCACATAA AGCGCCATTA
ATGAAGCCTA CTCAAGTATT TGAACCAAAC TCTGCAGATT CTATTGCACT GGCTAAAGCT
AACGCAGTAA ACCAGTTATT TGTTGAATCT GATTTCAAAG CGAAAGATGG CGAAGTGCCT
TACTTCCCAG ATTTTAACGC TGAAACTGGT TACATTCGTG TTGGCGATCA ACTCACTAAC
CTTGAAGGCG TTATTGGTTA TAGCTACAAC GCATACCGCA TCTTACCTAC TAACCTTATT
TCTGCTGGCG ATTTTATCCG TGTAAATGAT CGTACCGATG CGCCTACAGT GGCAGATATG
GGTGACATTC GCGTGGCGAG CTTTAACGTG TTGAACTTCT TCAATGACGT CGTTGGCGGT
GATGCTAATC CATCAGGCAG CAACCGTGGT GCATTAATAG AAGAAGAAAT GGTGTTACAG
CGTACTAAAA TTGTGAATGC GCTTGTAGCC ATGAATGCTG ATGTTGTTGG CTTAATGGAA
ATCGCTAACA ATGGCTTTGG CGAGTTAAGT GCTATTCAAA ACCTAGTAGA TGCATTGAAC
GCAGAATTAA CTGATGATCA AGCGTATCGT TTTGTTGAAA TTGAAGATGC TGATAAGTAT
GAAGACAAAT TTATCGGCAG TGATGCGATT ACGGTTGGCA TGTTATATCG CCCAGCCCGT
ATTACATTAG ACGGTGCGGC AAAAGTGATT GCGACGCCAG AACAACATGC AGCAGAAGGT
GCTCAAACCC GCGAGAAAGA TGGCGTTGTT GAGCAAAACC CAAGTTATGA CAAGTTCCAA
CGTCATAGTT TGGTGCAAAC CTTTAGCATT AATGATGAAA AACTGACGAT TGTGGTTAAC
CACTTAAAAT CGAAAGGTTC AGGTTGTATT GAAGATTGGG CTGACTTTAA CGAAAACGGT
GAGCCAGCGG ATTTACAAGG AAAGTGTAAC TCTTTCCGTG TATCGGCAGC TAAAGTACTC
GGTGAGTCAC TAAAAGATGT TGAAGGTGAT GTACTGGTTA TTGGTGATTT AAATGCCTAT
GGCAAAGAAG ATCCGGTTGC AGTATTAACT GATTATGATG CCTCAACCAC TGACCATGTT
ATCCGCACCG CATCGTGGAC TACCTTAAAC GGTAAAGTGT ACGAGCGTGA AGGCAGCGTG
ATTGATAAAG GTTATGGTTT AATTAACTTA AACACTCAAG CACATGGTGC AGATACTTAC
TCATATAGCT ATAACGGCGA ATTAGGTAAT TTAGACCATG CGTTAGCCAA TGAAAGTTTA
GCGGCTAAAT TAGTGGGTAT TGACGACTGG CACATTAACT CAGTTGAATC TAACCTGTTT
GAATATGGTA GCAAGTACAC CGGAGAGCTG GTTAAAACTG AAAGTCCATT CTCAGCTTCA
GACCACGATC CAGTGATTAT TGCATTAAGC TATCCAGCGC CAGTAACGCC AGTAACACCA
ACACCAGAGC CTGTTCAAGA CAGTGATGGT GGTAGCTTAG GCTACTTTGC GTTGATGTTA
TTAGGTGCGC TAGGCTTACG CCGTCGCAGT TAA
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| Protein sequence | MKGLTKLTAV SLAVAAALPI MANAEVLISE YVEGSSNNKA IELYNNSDVA IDLTGYKLVR
YKDGDSASLD MVELTDTIAA KSVKVILHPS AAITLPASTD SMTGNLYFNG GDAVGLLKDG
VLVDVVGEIP TPAGWGFDTT FQRKLDSLTA STTYDASQWA TLDKDTFSGL GSLDAAVTPE
PSTFTCNGAT LTNIYDIQGA GDSSPLIADG SYESANEVTV KGIVTSRSDS LYKGFFIQDM
QGDNSPYTSD GIFVFLNEAA PDTIQPGTEV CVQGKVNEYY GSTQINLKDE QKFEVGALGE
VPVASAFYVA DGETLTQALE RVEGMKVVLD AGSEMKITRT FSYDYDGRRN NMVLSHKAPL
MKPTQVFEPN SADSIALAKA NAVNQLFVES DFKAKDGEVP YFPDFNAETG YIRVGDQLTN
LEGVIGYSYN AYRILPTNLI SAGDFIRVND RTDAPTVADM GDIRVASFNV LNFFNDVVGG
DANPSGSNRG ALIEEEMVLQ RTKIVNALVA MNADVVGLME IANNGFGELS AIQNLVDALN
AELTDDQAYR FVEIEDADKY EDKFIGSDAI TVGMLYRPAR ITLDGAAKVI ATPEQHAAEG
AQTREKDGVV EQNPSYDKFQ RHSLVQTFSI NDEKLTIVVN HLKSKGSGCI EDWADFNENG
EPADLQGKCN SFRVSAAKVL GESLKDVEGD VLVIGDLNAY GKEDPVAVLT DYDASTTDHV
IRTASWTTLN GKVYEREGSV IDKGYGLINL NTQAHGADTY SYSYNGELGN LDHALANESL
AAKLVGIDDW HINSVESNLF EYGSKYTGEL VKTESPFSAS DHDPVIIALS YPAPVTPVTP
TPEPVQDSDG GSLGYFALML LGALGLRRRS
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