Gene Sfri_3702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3702 
Symbol 
ID4280595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp4394640 
End bp4395089 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content37% 
IMG OID638136515 
Producthypothetical protein 
Protein accessionYP_752368 
Protein GI114564854 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA ATTACGTCAA TTTTCTCGTC GGCCTGTTTG TATTATTCGG GATTGGGGCC 
TTGGTATTTA TGTCAATTAC CATTGGTGGA GCATCGGTTT CTAATAGTGG TAACTACACC 
TTAGTCGCTA AATTTGAAAA TTCTTCAGGT TTAAAAGAAG GTGCTTTTGT CGAAATGTCC 
GGTGTACGCG TTGGACTAAT TCAATCGATT AATTACGACC CTAAAGCGTA TGAATCAGTC 
GTTAAAATAT CATTAGATAA TGCGATTACT GTGCCTGATG ATTCGATAGC CTCCATTCGG 
ACATCTGGTA TTATCGGCGA CAGATTTGTT AAAATATCTA CCGGTGGTTC AGAAGTAAAC 
ATGGCAGATG GTGAAGAGTT TATAGAAACA GAATCATCAA TCAGCATAGA AGAGTTAATA 
AGCAAGTATA TGTTTAGTCA GGATAAATAA
 
Protein sequence
MKNNYVNFLV GLFVLFGIGA LVFMSITIGG ASVSNSGNYT LVAKFENSSG LKEGAFVEMS 
GVRVGLIQSI NYDPKAYESV VKISLDNAIT VPDDSIASIR TSGIIGDRFV KISTGGSEVN 
MADGEEFIET ESSISIEELI SKYMFSQDK