| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3700 |
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| Symbol | |
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| ID | 4280593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4392898 |
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| End bp | 4394055 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638136513 |
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| Product | serine phosphatase |
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| Protein accession | YP_752366 |
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| Protein GI | 114564852 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACATAG ACAGAGCGCT AGCTAACAGC ATTATTGATG AAACATTATG GTTTAAAACC
AATTTGGCGG TCACATTAAG TGAGTTCCAT TATTACTTAA TTAAAAAAAA CGGCCAAGTT
AGTTGTAATT TTTCATCCTT GTGCGATGAG CATTACAGTA GGCTCTATCA ACAATTTCAA
GCATTGTCGT TTCAACACAG TATTGCAGAA ATTTTGCCAT TAAATGACGA TGGTAAAGTG
TGCTGGGCAT TGCCTTTTGG TAAAGAATCG AGCTTGTTTG ACTGTATCAT TCTGCTCGAT
TTACCTGAAG GAACTGAATC TCAGCATGTT AGCTCGTTGT ATTTTAAGCT TTTGTATCAG
TTAAAAAGTT TTCAGTTTTC CGAAGCCTCA TCGCAACTTA ATGCTGCCCA AGTGTGGATC
CGCGACGAGA TAGAGGAAAT TTCACGCTTA CAACAGTTGA TGTTGCCAGA CAAGAATATC
GAACTCAGTT CTGTCAAAAT GGCTTACACC TATAAAGCGA TGAAAGGTGC TGGCGGCGAT
TATTTAGACA TTGTCGATCT TGGCAAAACT CGCCCTGAAG CCCAAGGCGA TATCGGAATG
ATTATTGCCG ACGTATCGGG CCATGGCCCT GCTGCTGCTG TAGAAACGGC AATGATAGAT
GCTATCTTAC GTACCTTTGA ACCGAAAGAT TTAAGCAGTA GTTCTTCTGA AGTACTTAAT
TATATCAATC AGCATTTCTT CACTAAAAAG CCACGCGGCA GTTTTTTAAC CGCCACAGTA
TTACGTTATA ATTTCAACGA AAAAGAACTG GTTTATGCTA ATGCAGGTCA TCCTCATGCC
TATTTGAAAA AAGCCAACAG GCTGGTTGCC CTAGATCAAG GCGGTATTCC TATTGGGGTG
TTGCGTGAGC AAAACTGGGA TACTTACCGG GTCAGTGTTG ATGTGGGTGA TATCTTGTTT
GTGTATACCG ATGTGGTCAT CGAAACACAA AATGCTCACA AAGAATTATT TGGTTTCGAT
CGCTTAGAAA AAGCCATCAG CGCAGCACCT GACGAACCCG AGGCTATGCT GGAATTTCTT
GAGCAGAAAA TGAAAAAGTT TTGTGGTTTT TCTGAATTTC AGGATGATTT GACCATGTGC
GCAATCCAGT TTATTTAA
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| Protein sequence | MNIDRALANS IIDETLWFKT NLAVTLSEFH YYLIKKNGQV SCNFSSLCDE HYSRLYQQFQ
ALSFQHSIAE ILPLNDDGKV CWALPFGKES SLFDCIILLD LPEGTESQHV SSLYFKLLYQ
LKSFQFSEAS SQLNAAQVWI RDEIEEISRL QQLMLPDKNI ELSSVKMAYT YKAMKGAGGD
YLDIVDLGKT RPEAQGDIGM IIADVSGHGP AAAVETAMID AILRTFEPKD LSSSSSEVLN
YINQHFFTKK PRGSFLTATV LRYNFNEKEL VYANAGHPHA YLKKANRLVA LDQGGIPIGV
LREQNWDTYR VSVDVGDILF VYTDVVIETQ NAHKELFGFD RLEKAISAAP DEPEAMLEFL
EQKMKKFCGF SEFQDDLTMC AIQFI
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