| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3690 |
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| Symbol | |
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| ID | 4280583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4379265 |
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| End bp | 4381016 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136503 |
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| Product | flavocytochrome c |
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| Protein accession | YP_752356 |
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| Protein GI | 114564842 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCACAG CAGGCCTAAT GGGCACTGCT GTTGCGGCTG ATAACTTAGC TGAATTCCAT
GTACAAAACC AAGAATGTGA TAGCTGCCAT ACACCAGATG GTGAACTGTC AAACGACAGC
TTAACCTATG AAAATACCCA ATGCGTATCT TGCCATGGCA CACTTGCTGA AGTAGCTGAA
ACCACAAAAC ATGAACATTA TAATGCTCAT GCTTCTCATT TCCCTGGCGA AGTAGCTTGT
ACCTCATGCC ACAGCGCACA CGAAAAATCG ATGGTGTATT GTGACTCTTG CCACAGCTTC
GATTTCAACA TGCCTTATGC TAAAAAATGG CTACGTGACG AGCCGACTAT TGCTGAATTG
GCCAAAGACA AATCAGAACG TCAGGCTGCT CTTGCTAGCG CACCTCACGA TACTGTTGAC
GTAGTGGTTG TCGGTTCTGG CGGCGCAGGT TTCTCAGCGG CAATATCAGC AACAGACAGT
GGTGCTAAAG TCATTCTTAT TGAAAAAGAG CCTGTTATTG GTGGTAATGC TAAGTTAGCT
GCGGGTGGCA TGAACGCTGC TTGGACTGAT CAACAAAAAG CCAAAAAAAT TACTGACAGC
CCAGAGTTAA TGTTCGAAGA CACCATGAAA GGTGGCCAAA ACATAAATGA CCCTGCATTA
GTTAAAGTAT TAAGCTCACA CTCTAAAGAC TCTGTTGATT GGATGACCGC TATGGGTGCC
GATTTAACTG ATGTTGGCAT GATGGGTGGC GCATCTGTTA ATCGTGCGCA TCGTCCAACC
GGTGGTGCGG GTGTTGGTGC TCATGTTGTT CAAGTACTTT ATGATAATGC AGTGAAACGC
AATATCGACT TACGCATGAA CACTCGCGGC ATTGAAGTGC TTAAAGATGA TAAAGGCACT
GTTAAAGGTA TTCTGGTTAA GGGGATGTAC AAAGGTTACT ACTGGGTGAA AGCCGATGCG
GTAATCTTAG CAACGGGTGG TTTCGCTAAA AATAACGAGC GTGTCGCAAA GCTTGATCCT
TCACTAAAAG GCTTTATCTC TACTAACCAA CCTGGTGCAG TAGGTGATGG ACTGGATGTA
GCTGAAAATG CGGGTGGCGC ATTGAAAGAC ATGCAGTATA TCCAAGCTCA CCCAACACTA
TCTGTTAAAG GTGGCGTAAT GGTCACTGAA GCGGTACGTG GTAATGGTGC GATTTTGGTT
AACCGTGAAG GTAAGCGTTT CGTTAACGAA ATTACTACTC GTGATAAAGC ATCTGCCGCT
ATCTTAGCGC AAACCGGTAA ATCAGCTTAT TTGATTTTTG ATGATTCTGT GCGTAAGTCA
CTGTCAAAAA TTGATAAGTA TATTGGTTTA GGTGTTGCAC CAACGGCAGA TAGCCTAGTT
AAATTAGGTA AAATGGAAGG TATTGACGGC AAAGCACTGA CTGAAACTGT CGCGCGTTAC
AACAGCTTAG TGAGTAGCGG TAAAGACACT GATTTTGAGC GTCCAAACCT ACCGCGCGCA
CTTAACGAAG GTAACTACTA TGCAATTGAA GTTACACCTG GTGTTCACCA CACTATGGGT
GGCGTGATGA TCGACACTAA AGCTGAAGTC ATGAATGCTA AGAAGCAGGT TATCCCTGGC
TTGTATGGTG CTGGTGAGGT TACTGGCGGT GTTCATGGTG CTAACCGCTT AGGTGGTAAT
GCTATTTCAG ACATCATCAC CTTCGGTCGC TTAGCGGGTG AAGAAGCTGC AAAATATTCT
AAAAAGAACT AA
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| Protein sequence | MGTAGLMGTA VAADNLAEFH VQNQECDSCH TPDGELSNDS LTYENTQCVS CHGTLAEVAE
TTKHEHYNAH ASHFPGEVAC TSCHSAHEKS MVYCDSCHSF DFNMPYAKKW LRDEPTIAEL
AKDKSERQAA LASAPHDTVD VVVVGSGGAG FSAAISATDS GAKVILIEKE PVIGGNAKLA
AGGMNAAWTD QQKAKKITDS PELMFEDTMK GGQNINDPAL VKVLSSHSKD SVDWMTAMGA
DLTDVGMMGG ASVNRAHRPT GGAGVGAHVV QVLYDNAVKR NIDLRMNTRG IEVLKDDKGT
VKGILVKGMY KGYYWVKADA VILATGGFAK NNERVAKLDP SLKGFISTNQ PGAVGDGLDV
AENAGGALKD MQYIQAHPTL SVKGGVMVTE AVRGNGAILV NREGKRFVNE ITTRDKASAA
ILAQTGKSAY LIFDDSVRKS LSKIDKYIGL GVAPTADSLV KLGKMEGIDG KALTETVARY
NSLVSSGKDT DFERPNLPRA LNEGNYYAIE VTPGVHHTMG GVMIDTKAEV MNAKKQVIPG
LYGAGEVTGG VHGANRLGGN AISDIITFGR LAGEEAAKYS KKN
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