| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3688 |
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| Symbol | |
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| ID | 4280581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4375464 |
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| End bp | 4376849 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136501 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family protein |
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| Protein accession | YP_752354 |
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| Protein GI | 114564840 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTAG CCAGAAATAT TCTGTTAATC GACGACGAAG CTGCATGGTT ACGAACACTC
GCGATAACCC TTAACCGCCT AGTTCCCGAA GCTGAAATTG ACACTTGTGT CGACAGTCGC
CAGGTGAGTA GTCGCTTACA GGTTGGCGAC TATGCGCTAG TGCTAGTTGA TCTCACTATG
CCATTTCACT CCGGTGAAGA ATTATTAGCG ATGATCCGCA GCGATTTCCC TAACACTCGA
GTCATTATAG TGACTGGGGT AAATGAGGTT GATACTGCAG TTCGTTGTAT TAAGAATGGT
GCTTATGACT ACTTTATTAA AACAGACAAT GTCGATGAAC TTGCACGAAC AGTTCGCCGT
GCACTTGAAG TGGTCGGGCT TGAAAGAAAC TACCTTTATA TCAAAGAGAA ATTTTTAAGC
CGAACCTTAG ATAACCCGCA AGCATTCAAT AACATGTTAA CTTGCGAGCC ACAGCTATTA
GATCAGTTTC GTTATCTTGA AGCCGTATCA TGTAGCCCTG AGCCCTTGTT AATTTATGGC
GCTAGCGGAA CCGGTAAAAG CGAGTTTGCT CAATCTTGCC ATGCACTTTA TAGCCCTAAT
GAACCCTTCG TTAGCATTAA TCTTGCGGGT ATTAGTTGTG AGTCATTTGA GCAAAAAATG
TGTGGTCAAC TGTATCATCA CAATAATGGC GAGCTAGAAG CAGTTGCAGG TTTATTGCAT
CAAGTGGGCA GTGGGGTACT CTATCTTAAT GAAATTGGCA CGCTACCATT GGATGCTCAA
GTTAAGTTAT TAGCGCTGTT AGAAAGCAAA CAATATTACC CTTTAGGTAG CGACACTGCC
TATCCGGTAA AATGTAAGTT TGTGGTATCA ACTCAAGATG ATTTACTCAA ACTTCATCAA
GCAGGTAAGT TTAGGAGCGA TCTACTCTAC CGTTTACGGG CACATAAAAT TAAATTACCG
CCATTAGCTG AAAGGCAGTT AGATATTGCG ATGTTGATCA ATCATTTCAT CGCCCTAGCC
GCAGCAGAAA TGAATTTACC AGCGCCGATT CAACCTGCAG ATTTAGCCTC TAGACTAGCC
AGTTATGATT TCCCCGGTAA TCTACACGAG CTCAAAGGCA TGGTATTTGA TGCCGTTAGT
CGCAGTGATG GCATAGCGCT TAACACCTCT GCTTTTATGG AAGCCATTAA TGAACACAAA
TCATTAACGG CAGTACCGCA AGACCGAATT ATCTTTCCTA AACAACTGCC TACCATTGCA
CAGATGAACC AAGCGTTAAT GGACGAAGCC ATGAGCCGTA CAGCTAACAA CCAAACAGCG
GCAGCGCAAA TATTGGGAAT TAGCCAAAGT GCATTAAGCA GGCGGTTGAA GGGCATTAGA
TGTTAA
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| Protein sequence | MKLARNILLI DDEAAWLRTL AITLNRLVPE AEIDTCVDSR QVSSRLQVGD YALVLVDLTM
PFHSGEELLA MIRSDFPNTR VIIVTGVNEV DTAVRCIKNG AYDYFIKTDN VDELARTVRR
ALEVVGLERN YLYIKEKFLS RTLDNPQAFN NMLTCEPQLL DQFRYLEAVS CSPEPLLIYG
ASGTGKSEFA QSCHALYSPN EPFVSINLAG ISCESFEQKM CGQLYHHNNG ELEAVAGLLH
QVGSGVLYLN EIGTLPLDAQ VKLLALLESK QYYPLGSDTA YPVKCKFVVS TQDDLLKLHQ
AGKFRSDLLY RLRAHKIKLP PLAERQLDIA MLINHFIALA AAEMNLPAPI QPADLASRLA
SYDFPGNLHE LKGMVFDAVS RSDGIALNTS AFMEAINEHK SLTAVPQDRI IFPKQLPTIA
QMNQALMDEA MSRTANNQTA AAQILGISQS ALSRRLKGIR C
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