Gene Sfri_3683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3683 
Symbol 
ID4280576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4367708 
End bp4368370 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content41% 
IMG OID638136496 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_752349 
Protein GI114564835 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR02951] DMSO reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.942546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAC AAACTCAATA TGGTTTTTAT TTAGATACCA CCAAGTGCAC AGGTTGTAAA 
GCGTGTCACA TATCTTGTAA AGATAGACAA GGTGATATTA TTCGCAAAAC TAATCCAATT
GAACAAGGTG TACCGGCATT AGAAGGTATT AACTGGCGCC GAGTATATGA ATATGGTGGT
GGTGATTGGT CTACTAATGC TGACGGTAGT TTCGAGCAAA ATGTTTTCTC TTATTACACC
TCTATTAGCT GTAATCATTG TAACGAGCCT GTATGTGTAA AAGCATGTCC TACTGGTGCC
ATGCATAAGC GTCGTGAGGA TGGGTTAGTT CTTGTTCATA CAGACTTATG TATTGGTTGT
AATAGTTGCG CTGAGGCTTG CCCATATGAC GCTCCACAAT TAGATCCCCA ACGGAAAGTA
ATGACTAAGT GTGATGGTTG TTACGATAGA TTAGCACAAG GAAAGCAGCC CATTTGTGTT
GGTTCATGCC CATTACGTGC ATTGGATTTT GATACGATGG AAAACTTACG TGCTAAGTAT
GGTAATGGCG ACGGACATAT AGCACCACTA CCACCACAAA GTATTACCTC ACCAAACTTG
ATCATAAAAG CAAACAAGAA CGGTGGCCGC CAAGGTGAAG TGTTGAACTA CTCTGAAGTT
TAA
 
Protein sequence
MTEQTQYGFY LDTTKCTGCK ACHISCKDRQ GDIIRKTNPI EQGVPALEGI NWRRVYEYGG 
GDWSTNADGS FEQNVFSYYT SISCNHCNEP VCVKACPTGA MHKRREDGLV LVHTDLCIGC
NSCAEACPYD APQLDPQRKV MTKCDGCYDR LAQGKQPICV GSCPLRALDF DTMENLRAKY
GNGDGHIAPL PPQSITSPNL IIKANKNGGR QGEVLNYSEV