Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3674 |
Symbol | |
ID | 4280567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 4355323 |
End bp | 4357050 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638136487 |
Product | putative sulfate transporter YchM |
Protein accession | YP_752340 |
Protein GI | 114564826 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATACC GCACACATTT ATTTTCTCTT CGTATCGGGC ATGCACTCCG AGAGTCTTTA AAAGACGCTC CCTACAATGC CAATGCATTC ACTAAAGATT TATTAGCCGG CTTAACTGTT GGCATTATTG CTATTCCATT AGCAATGGCG CTTGCGATTG CCATTGGGGT CGCGCCGCAA TACGGGTTGT ATACTGCGAT TATTGCTGGG TTTGTTATTC CGCTCACCGG TGGCTCACGT TATAGCGTGT CTGGCCCTAC CGCCGCATTT GTGGTGATCC TCTATCCCAT CGTGCATCAA TATGGTCTGT CTGGTTTATT GCTGGCCAGC ATGTTATCCG GACTAATGTT GATTATCATG GCGTTGTTTC GCTTAGGGCG TTATATCCAA TATATTCCCG AATCAGTCAC GTTAGGGTTT ACGGGTGGTA TTGCCGTGGT GATTGCAGTG CTGCAAGTTA AAGACTTTTT TGGTCTAACT ATTACCGAGA TGCCAGAAAG TTTTGTCGGT AAAGTAGCTA CCTTAGTTCA AGAAATTCCT AGTTTTTCGG GGCCGACATT ACTGGTGGGA TTAAGCACAT TAGTGGTGTT TATTTTGTGG CCAAAACTCA AGTTGGCGGT ACCCGCACAT CTTCCTGCAG TGGTTGTGGC GAGTATTGTG GCGCTGGTAC TAAATCAACT CGGTTTTCAT GTGGCGACCA TTGGATCTAC GTTCAGTTTC ACCCTAGCCG ATGGCTCAAT CGGTGCAGGT ATTCCCTCTA TGCTGCCTGA CTTTGAATGG CCCTGGCTTC GCGCGCAATC GGGTGAAGTG CCATTGGTAC TCACTTGGCA ATTAGCCAGT GACCTATTGT CTGCCGCCTT TGCTATCGCC ATGTTAGGTG CCATTGAATC GTTACTGTGC GCAGTGGTGC TAGACGGCAT GTCAGGTAAA AAGCACAGCG CCAATAGCGA GTTACTTGGT CAAGGTATCG GTAATATTAT CGCGCCATTT TTTGGCGGTA TTACCGCGAC TGCTGCCATC GCTCGTTCGG CGGCTAACTA TAAGTCGGGG GCGGTAAGCC CAATCGCGGC CATGATCCAT GCGCTGGTGG TGTTAGTGTC TTTATTATCG CTCAGCACTG TTTTAGCTTA TATCCCCATG GCGGGCATGT CGGCGCTGCT TATTATGGTG GCTTGGAACA TGAGTGAAGC GCCTAAGATT GTCCATCTTG TTAAAAAAGC CCCTGCCAGT GAAATACTGG TGTTGATGGT GTGCTTGTTA CTGACCATAT TTTTTGACAT GGTGATTGCG ATCAGTGCTG GGATCATTTT GGCGTCGTTA TTATTCATGA AACAAGTGGC CGACATGACC AAGGTGCAAG ACATTAGCGA GCAGAAAAAG CACATTCATG TTGAGTTACC GCCACGCTGG AAAGTGTTTA AAATTAATGG GCCATTGTTT TTTGCTGCTG CCGACAGTGT GTTTGGTGAG TTGGCGCATT TGAGTGGCGA CCAGGATGGG GTGGTGTTGT ATTTTGACGG GGTGTCTATT TTAGACTCTG GTGGCGTTTC GGCGCTGTAT AAGTTTATTG ATAAATGTAA GCGTGATAAT ACTCGAGTCT TGTTGGCCGA TTTTCAATTT CAGCCACTTA AAACCTTAGC CAAAGCAGGG TTTAAGCCAG ATGGTGTGCA ATGTGTGACA TATTCTACGC TGGCAGATGC ACTTGATGAT GTGGTGGCTG GAGCTTAA
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Protein sequence | MKYRTHLFSL RIGHALRESL KDAPYNANAF TKDLLAGLTV GIIAIPLAMA LAIAIGVAPQ YGLYTAIIAG FVIPLTGGSR YSVSGPTAAF VVILYPIVHQ YGLSGLLLAS MLSGLMLIIM ALFRLGRYIQ YIPESVTLGF TGGIAVVIAV LQVKDFFGLT ITEMPESFVG KVATLVQEIP SFSGPTLLVG LSTLVVFILW PKLKLAVPAH LPAVVVASIV ALVLNQLGFH VATIGSTFSF TLADGSIGAG IPSMLPDFEW PWLRAQSGEV PLVLTWQLAS DLLSAAFAIA MLGAIESLLC AVVLDGMSGK KHSANSELLG QGIGNIIAPF FGGITATAAI ARSAANYKSG AVSPIAAMIH ALVVLVSLLS LSTVLAYIPM AGMSALLIMV AWNMSEAPKI VHLVKKAPAS EILVLMVCLL LTIFFDMVIA ISAGIILASL LFMKQVADMT KVQDISEQKK HIHVELPPRW KVFKINGPLF FAAADSVFGE LAHLSGDQDG VVLYFDGVSI LDSGGVSALY KFIDKCKRDN TRVLLADFQF QPLKTLAKAG FKPDGVQCVT YSTLADALDD VVAGA
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