| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3666 |
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| Symbol | dipZ |
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| ID | 4280559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4345434 |
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| End bp | 4347320 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136479 |
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| Product | thiol:disulfide interchange protein precursor |
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| Protein accession | YP_752332 |
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| Protein GI | 114564818 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.162085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAA GACAACTCAC CATCATGAAA AAACTCGTTG CCATATGCCT TACATCATTG
TTAATGATGT CATCAATTTT ACTCGCGCCA GCAGCACACA GTGCTAATGT GTTGAGTAAT
AAATTCAGCT TTTTAAGCAG CGAACCTGAG TTAATGAAGG TTAACGATGC TTTTGTGTTT
GATTACCAAC AACAAGGTAA TCAACTCAAA ATCAATTTTG TCATTGCTGA AGGCTATTAT
TTATATCGCG ACAAGCTGCA GTTTTCGGTC GACGGTGCAG TGATTGGCGA TATTGAATTA
CCTCATGGTA AAAACCATCA CGACGAATAC TTTGGCGACC AAGAGGTGTT TTACTCGTTT
GTTGAAATCC CTATCGCATT TAAAGAAGCC CAAGCCGATG CGGTATTTCA TGTCACCTTT
ATGGGTTGTG CAGAAGGTAC TTTGTGTTAC CCGCCCACCA AACACGATGT AACGTTAACA
GCGATTGAAG CAAATGACGG CACATTAAGC AGTAAAAAAG TGATTGGTGC ACCTGATGAC
GCGCAAGCAT CGACAACGGC AACCGATGCT CCTGCAGCAC CCATTACTCA GCAAGACACG
TTAAACCAAA TGCTCCAAAA CGATAGCCTA TTATGGACCT TGGTGATTTT CTTTGGTTTA
GGTATTGGCT TAGCATTAAC ACCATGTGTG TTTCCGATGT ACCCTATTTT GTCGGGCATT
ATTGTTGGCC AAGGTAAGAA GTTATCTACC GCTAAAGCCT TCACTCTATC AATGGCCTAC
GTACAAGGCA TGGCGATTAC CTACTCTTTA TTAGGATTAG TGGTTGCCTC TGCCGGACTT
AAGTTTCAAG CAGCCTTGCA ACACCCAGCC ATTTTGATTT TCTTAGCGGT GATGTTTGTG
CTGCTGAGCT TATCAATGTT TGGCATGTAC GATTTAAAAC TGCCATCGAA GTGGCAAGAA
AAAATGAACT CGATGTCGAA CAACCAAAAA GGTGGCAACC TTATTGGTGT GTTTATGATG
GGGGTGATTT CAGGTTTAGT CGCTTCGCCT TGTACCACGG CGCCGTTATC TGGCGTGCTG
ATTTACGTGG CGCAGTCTGG TGATTTACTG CAAGGCTTTT TAGCGCTGTA TGTACTCAGC
ATGGGTATGG GTTTACCGTT ATTAGTGATT GGTACTTCGG GTGGCAAAAT CTTACCACGC
GCAGGAGCGT GGATGGACAT TATTAAAACC ATCTTTGGTT TCTTACTAAT TTCAGTCTCG
ATAGTAATGA TTGGCCGTAT TTGGCCTGGT TTAGTGTCCG ATTTACTCTG GTCATTATGG
GCAATATGCT TAGTCGCTTA CTTAATGCAT CAAAACAGGT TGTCAGAATT TAACTGGAAA
CAAAGCACTC GTGGGGTATT TTTACTACTG GCTTTGATGG CAAGCTTTTC GTATGGTTTC
CAAGCAATCA TGACAGGTTT TGGTCATAAA ACCCCAGATA TTACTCAAGC GGGTGTTGAA
GGAAAAACCC AAAATAAAGA GAATCATTTT ATTCGTATTA AGTCGCTTGA AGACTTAGAA
GTTGAATTGG ATAAAGCCAG CATTAGCGGT AAAACGGTGA TGTTAGATTT ATACGCCGAC
TGGTGTGTGG CCTGTAAAGA GTTTGAAGCG ATTACCTTTA AAAATAAAGA TGTCGCCACG
CGCATGAGCC AAATGGTGCT ATTGCAAGCT GACGTAACGG CCAGCGATGA CATTGATATC
ACCCTTTTAG AACATTATGG CGTGTTAGGT TTACCTACCT TGTTAATGTT TAATAGCGAT
GGCAAACAGC GTGAAGATTT ACGAGTTACT GGCTTTATGG GACCAAAAGA CTTTGCCGCT
CATTTAGATA TCCTGCTAGC AAAGTAA
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| Protein sequence | MDKRQLTIMK KLVAICLTSL LMMSSILLAP AAHSANVLSN KFSFLSSEPE LMKVNDAFVF
DYQQQGNQLK INFVIAEGYY LYRDKLQFSV DGAVIGDIEL PHGKNHHDEY FGDQEVFYSF
VEIPIAFKEA QADAVFHVTF MGCAEGTLCY PPTKHDVTLT AIEANDGTLS SKKVIGAPDD
AQASTTATDA PAAPITQQDT LNQMLQNDSL LWTLVIFFGL GIGLALTPCV FPMYPILSGI
IVGQGKKLST AKAFTLSMAY VQGMAITYSL LGLVVASAGL KFQAALQHPA ILIFLAVMFV
LLSLSMFGMY DLKLPSKWQE KMNSMSNNQK GGNLIGVFMM GVISGLVASP CTTAPLSGVL
IYVAQSGDLL QGFLALYVLS MGMGLPLLVI GTSGGKILPR AGAWMDIIKT IFGFLLISVS
IVMIGRIWPG LVSDLLWSLW AICLVAYLMH QNRLSEFNWK QSTRGVFLLL ALMASFSYGF
QAIMTGFGHK TPDITQAGVE GKTQNKENHF IRIKSLEDLE VELDKASISG KTVMLDLYAD
WCVACKEFEA ITFKNKDVAT RMSQMVLLQA DVTASDDIDI TLLEHYGVLG LPTLLMFNSD
GKQREDLRVT GFMGPKDFAA HLDILLAK
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