Gene Sfri_3658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3658 
Symbol 
ID4280551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4336551 
End bp4337279 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content37% 
IMG OID638136471 
Producthypothetical protein 
Protein accessionYP_752324 
Protein GI114564810 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00288] conserved hypothetical protein TIGR00288 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.339092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATA AGGATAAAAT CGCAGTATTT ATTGATGCTG ATAATGCTCC TGCAAAGAAA 
ATTGATAAAG TGTTATCAGA ACTTGCTCGC TATGGTGTGG TAAATATACG TAAGGCTTAC
GGTAATTGGA AAAATGCTAA TTTAAAAACT TGGGAAGATG TGCTGCATGA GTATGCAATT
CAACCCATCC AGCAATTCGA TTTAACTAAA GGTAAAAACG CCACAGACAT GGCACTGGTT
ATTGATGTTA TGGATGTTTT ATATACAAAA GATGTAGATG TTATTTGTTT AGTCTCATCA
GATTGCGATT TTACCCCCTT AGTCACTAGA GCACTGGCGG ATGGTAAAAC CATCATCGGG
TTTGGAGAGC GCAAAGCTCC TATGCCATTT GTGAATAGTT GTTCTCGATT TTTATTTCTC
GATGATGACC CAAGTGAAGA TATTCCATTA CCTACAGCCA CTAAAAGCTT AAACAAGAAC
ACAAAGCTCA TCAGTTTATT GGGGCAAGCT ATTGAAGCTG TAGAGGAAGA TGACGGATGG
GCAATGTTAG GACCTATAGG TACTCATATT TCTAATCATG CCTCGTTTGA TCAACGTAAT
TATGGCTTCA AGAAGCTGAG TGATTTATTC GCATCTATAG ATCTTTTTGA TATGAAAAAA
ACCAACGGCT CAGTCATTTG GGTAAAAGAC AAAAAAAGGC ATAAAACGGC AAACGGTAAG
GGGAAATAA
 
Protein sequence
MKDKDKIAVF IDADNAPAKK IDKVLSELAR YGVVNIRKAY GNWKNANLKT WEDVLHEYAI 
QPIQQFDLTK GKNATDMALV IDVMDVLYTK DVDVICLVSS DCDFTPLVTR ALADGKTIIG
FGERKAPMPF VNSCSRFLFL DDDPSEDIPL PTATKSLNKN TKLISLLGQA IEAVEEDDGW
AMLGPIGTHI SNHASFDQRN YGFKKLSDLF ASIDLFDMKK TNGSVIWVKD KKRHKTANGK
GK