| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3642 |
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| Symbol | |
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| ID | 4280535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4320961 |
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| End bp | 4323192 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638136455 |
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| Product | peptidase domain-containing protein |
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| Protein accession | YP_752308 |
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| Protein GI | 114564794 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.216173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTTTA CTCAAAAAAA TGGATGTTTT ATGTTTATAT GTCAACGGAT GACGATGGTG
ATATTATCAT CAATATTATT TTTTATACTT TCAGCTTGTG GTGGTGGTTC CTCTGATGAG
CCGGCAAAAA CTGCACCGCC AGCCCCTAAA ATTATCTACA CTGATTATAC CATTACAGCC
ATTGACGGTT ATTTAGAAAA TGCGACTGCA TGGTTAGATG TAAATAATAC GGGAAGTTAC
TCTTCAACTC ATCCAACATC TCAAACGCAT GGCAATGGAG AGGCTATTTT AAGTATTCCA
GATACTTTAA TAGCAACAAA TTTTCCAGTT ATTGTAGAAG CAAAACCGTT GATCACTTTT
GATAAAGGTC TTAACCGGTT AGTCACTAAT AGTTTTACTT TAGCTGCACC AGCAGGTGAG
AGGGTAGTGA CTCCATTCTC TACGCTTGTG TATATTAAAA TGAAATCTGG ATTGTCTCAA
GATGCTGCTA TTTCTGACAT TGCTAATGAG TTACAAATTT CAAATGTTGA ATTACTTACA
GATTTTATTG CTAATAATAA TCAACGTATG ACATTAATTG CTGCAGATAT GGTGAGATTA
AATATTTTCC CAGAAACACC TACTCAATTA GTCGAGGTGA CTGTTAACCC GCTAAATATT
TCAACCGAAG TTACTCAATA TGCCAATATA CAAAGTGACA CCAGTAGCTT TAAAGCCGTT
GTTAGAAATT CATCTAATAT TATTGAATTG GATACTGATA ATGATGGTAT TGCCGATGGT
GAAGATGGGG ATATTGATGG TGACGATATT CCAAATGAAC AAGATCCTTA TCCCTACATT
ATTGATCGCC ATACAGAAAG AAAGCCAAGT GAATTACTAC TGGGACAGAT AAAAACTGAA
ACTCTCCTAG CGGGTCAATG GCATTACTTT GAATTGACAA CTCTAGATAA TATTTTATTA
AATGTTAATT TGTCGCAATT AACAGGAGAT GTCGATCTAT ATGTAAAGCA AGATTCGGTT
CCGACAAGGT TTGATTATGA TTGCCGTTCA AATAATAGTT TCCAAAGCGC AGAAAAGTGT
CTTCAAAGAT TAAAACAAGG TCAAAAACAT TTTATTGCCG TTGCGGCGAG GGAGGACTCA
GGGTATCGCT TAGAAGCTAT TTTAGATGAA ATAGTAGTGA GTAAAGTGAG TTTATTGTTG
CATGGCTTAG CGTCAGAGGC AGGGACTTGG AATAAGCTAG TTGATGATGA TAGTTTCTTT
TCTGGTTCAT GTACTAGGTT GAATATAGCT GATGAACTAA CCGAATTGCC CCAAGCTAAC
AGTAAAGGTG AATATTGCTT TAGGCTTGAT TTTGGTGGTT ATGACCGAGA TAGTGGCTTA
GCCACAGCTG GTTTAGATGG TAAAACGTGT ATTACTGTTG ATGGATGTAA TGGTGACTTT
TCAAACTTTA ATTTATTAGG TAAAGAAGTC GAAACCGCTA TTGACCAAAT TGTGACTGCA
TTAGGTATAG ATACTGAAGT TGTTTTGCTT GGACACAGTC GCGGTGGGTT AGCTGCTAGA
GCTTATTTAC AAAATTCGGA TTCACTATAT AAAGAATACG TTAAAAGTTT AGTTACTACT
GGTACTCCAC ATCAAGGCTC ACCTTTAGGG CGTTTTTATC GTTTTATGGA ATTAAATTGT
ATCCCACAAA TTTCTTATCA AAATGATAGT GGCATGTGTG AAGATAACTG GGAAGTTGTC
AAAATGTTAG CTGGAGAACG ATGGTACTTA GATTATGAGT ATATAGATTT AAGAGTTCCC
AGTATTGACT TTTTGTCGCC AGAATCTACA GAAATAATAG AGTTAAATGG TAATATTTTA
GCTCTTGAAA ATATCATTAT TGCTCAATTG AGTTATCGTG GAACCAACTT TGGCATATTA
GCAGAGGATG TTGGATTAGG TTCTGATTAT GATCTATATG ATTATGGCGC ATGGTTCGGG
GGTGATCATC CACATCCAAG TACCCTGCGT TATATTGAGA ATGGCCAAAC AAGAGATAGT
TTTATTGGTG ATGGTATCGT TCCTGCTTAT AGCCAACAGT TGAGTGAGTT ATTGATTCCT
GTTGCTCGAA ATGTTGATTT ATCTTTTTCT AGTACAGCAT ACAATGTAAT CCATACAGAA
CAGACTCAAC AAGTGAGTGA TTTATACTCA ATGTTTGAAT CGGTTCGGGT ACAAATTGGC
TGGGAGCAGT AA
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| Protein sequence | MFFTQKNGCF MFICQRMTMV ILSSILFFIL SACGGGSSDE PAKTAPPAPK IIYTDYTITA
IDGYLENATA WLDVNNTGSY SSTHPTSQTH GNGEAILSIP DTLIATNFPV IVEAKPLITF
DKGLNRLVTN SFTLAAPAGE RVVTPFSTLV YIKMKSGLSQ DAAISDIANE LQISNVELLT
DFIANNNQRM TLIAADMVRL NIFPETPTQL VEVTVNPLNI STEVTQYANI QSDTSSFKAV
VRNSSNIIEL DTDNDGIADG EDGDIDGDDI PNEQDPYPYI IDRHTERKPS ELLLGQIKTE
TLLAGQWHYF ELTTLDNILL NVNLSQLTGD VDLYVKQDSV PTRFDYDCRS NNSFQSAEKC
LQRLKQGQKH FIAVAAREDS GYRLEAILDE IVVSKVSLLL HGLASEAGTW NKLVDDDSFF
SGSCTRLNIA DELTELPQAN SKGEYCFRLD FGGYDRDSGL ATAGLDGKTC ITVDGCNGDF
SNFNLLGKEV ETAIDQIVTA LGIDTEVVLL GHSRGGLAAR AYLQNSDSLY KEYVKSLVTT
GTPHQGSPLG RFYRFMELNC IPQISYQNDS GMCEDNWEVV KMLAGERWYL DYEYIDLRVP
SIDFLSPEST EIIELNGNIL ALENIIIAQL SYRGTNFGIL AEDVGLGSDY DLYDYGAWFG
GDHPHPSTLR YIENGQTRDS FIGDGIVPAY SQQLSELLIP VARNVDLSFS STAYNVIHTE
QTQQVSDLYS MFESVRVQIG WEQ
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