| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3628 |
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| Symbol | |
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| ID | 4280521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4305902 |
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| End bp | 4307068 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638136441 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_752294 |
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| Protein GI | 114564780 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGTC CGTTTACGTA TATTTTAATC ACCTTGTTTT TTTCTAGCAT TCTGCTGTCG
ATAATCTTTT TCATGACATG GCAAACCATG GGAAAACAAA AATATGCGTT AATGTTTTCA
TTATCTTTTT TAGCCTCAAC AGTGCTGTGG GCTAATAGTC TGTTTAAAAG CTTATTTCTT
TCTCACGAAC TGTATTGGAT GATAGGTTGC AGTGTTTCCA TGCTGTCGGT GGTGCTCGGG
ACATGGGGGC ATTGCTTACG CACTAACACT AAAATCCATC CCGCAACACT GCTAGGCATA
GGCGTATTTG GGATGATGCT AACCTATTAC TTTACGTATA TTAGCCCCCA CCTAGGCTTA
AGAATGTCGT TGTATTTATA CGTTGATGTG TTGTTATTGA TGATCACCAG CGTGGTGATT
ATTAAACACC GCACCAAATC ACGCCCTGCC GAAATTGGTG CGTCGTTAAT GCATTTCATA
TTTGCAATGT GCATATTGGT TGCAGCGAGT ATCGCACTAT CCCAAGGTAA AGAGATGGAT
GTAGAACTTA TAAAGCTCTA CGCCATTGTT AACTTTACCG CCCTACCTGC GGCTTATGTT
GGGATGTCAG TATTTGTGAT TTATATGCTG GCTTCTGATT TGGCCGAAGA AATGAAGTTG
CTGGCGATGA CAGATCCGCT GACTGATTGC TTTAATCGTC GGGGATTTTA TAGCCACGCA
AAACAAAAAT TACTTGAGTT ACAAAAGCAG CCGCAACATG CGTGCCTCAT TTATTGGGAT
ATAGATAAGT TTAAAGCAAT TAACGATCAG TTCGGCCATG CTGGCGGCGA TCAAGTATTA
ATCAGCATTA CCCAGTTAAT CAAACAACAT ATAAAAAAAG ACGACTTAAT CGGCCGCATG
GGCGGTGAAG AGTTTGTTAT ATTAATCGAG CGCAGCAATT ATCAGGAGGC TATCAATGTC
GCCGAGCGAT TAAGGGCCAT GATTAACCAA ACACCTATTG TTTATTGCGG TCAGCAAATT
AGCGTGACCG CCAGTTTTGG GGTCGTTGAA CTCAGTAACC AAGACATACC AATAGAACAA
GCAATCGATC TCGCCGACAG CGCGTTATAT CAAGCCAAAA GCAGTGGCAG AAACAAAGTA
GTCTTTAGCG AACTCAGCTC AAGATAG
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| Protein sequence | MESPFTYILI TLFFSSILLS IIFFMTWQTM GKQKYALMFS LSFLASTVLW ANSLFKSLFL
SHELYWMIGC SVSMLSVVLG TWGHCLRTNT KIHPATLLGI GVFGMMLTYY FTYISPHLGL
RMSLYLYVDV LLLMITSVVI IKHRTKSRPA EIGASLMHFI FAMCILVAAS IALSQGKEMD
VELIKLYAIV NFTALPAAYV GMSVFVIYML ASDLAEEMKL LAMTDPLTDC FNRRGFYSHA
KQKLLELQKQ PQHACLIYWD IDKFKAINDQ FGHAGGDQVL ISITQLIKQH IKKDDLIGRM
GGEEFVILIE RSNYQEAINV AERLRAMINQ TPIVYCGQQI SVTASFGVVE LSNQDIPIEQ
AIDLADSALY QAKSSGRNKV VFSELSSR
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