Gene Sfri_3626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3626 
Symbol 
ID4280519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp4303980 
End bp4304609 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content46% 
IMG OID638136439 
Productflavoprotein oxygenase 
Protein accessionYP_752292 
Protein GI114564778 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCTG ATAATCGCTA TTTTTATGAA CCTAGTAAAG GTCATGGCCT GCCACATAAC 
CCACTCAATG CCATTATTGG CCCACGCCCC ATTGGCTGGA TTGCCTCTCG CAATACCCAA 
GGCCAGCGAA ATCTAGCGCC TTATAGTTTC TTTAACTGCT TTAATTACGA TCCGCCAATT 
ATCGGTTTTG CCAGTACTGG TTGGAAAGAC AGCGTCGCCA ACATTGTTGA AACTGGCGAG 
TTTGTATGGA ACTTAACTAC CCGCAGTTTA GCCGCGCAAA TGAACCAAAC CTCTGCCGCA 
TTACCCCGTG GTACTGATGA ATTTGAATTT GCCGGACTAA CGCCAATAGC AGGCAACATT 
GTTAAAGCCG ATCGCATTGC ACAAAGCCCA GTCAGCTTCG AATGCAAACT GTCGCAATGC 
ATTCAGTTAA CCGCAGCTAA TGGTGACAAA ATTGATACTT GGCTAGTACT TGGTGAAGTA 
GTGGCTGTGC ATATTGAAAA GCACTTGCTG AGCGCAGAAG GGATTTATCA AACAGCATTA 
GCTGAACCCG TATTACGTGC TGGCGGCCCA TCGGCTTATT ATGGTATTTC TGACGAGTTA 
CGTTTTGATT TACATCGCCC GACTTTATAA
 
Protein sequence
MSADNRYFYE PSKGHGLPHN PLNAIIGPRP IGWIASRNTQ GQRNLAPYSF FNCFNYDPPI 
IGFASTGWKD SVANIVETGE FVWNLTTRSL AAQMNQTSAA LPRGTDEFEF AGLTPIAGNI 
VKADRIAQSP VSFECKLSQC IQLTAANGDK IDTWLVLGEV VAVHIEKHLL SAEGIYQTAL 
AEPVLRAGGP SAYYGISDEL RFDLHRPTL