| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3621 |
|---|
| Symbol | |
|---|
| ID | 4280514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 4297940 |
|---|
| End bp | 4298536 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638136434 |
|---|
| Product | DSBA oxidoreductase |
|---|
| Protein accession | YP_752287 |
|---|
| Protein GI | 114564773 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3917] 2-hydroxychromene-2-carboxylate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAG CAATAGATTA TTATTTTACT AGCCTTTCAC CTTATGCCTA TTTAGGCCAT
AACACCTTTA CCTCGTTGGC TGAACAGCAC AAAACTGCTA TCAACTATAA GCCGATTAAA
CTGCCAAAAT TGTTTGCAGT ATTAGGTGTG TTACCGGTAA AACAACGCCT GCAAGCCAGG
CAAGACTATC GTTTGATTGA GTTAGCTCGT TGGTCAACAA AGCGCAAATT AACCCTTAAT
CTGCAGCCCG CTTTCTTCCC TGCAGACCCA GGCTTGGCCG ACAGATGTAC TATTGTGTTA
CAGCAAGCTG GACAAGCTGT CAGTGAGTTT GTTGCCAATG TACTGGCAGC ATGTTGGGCA
AAAGATCAAA ACATTGCAGA CGAAGCGGTT ATCCGACAAA TATTAACCTC ACTCAATCTA
GATGCCGACG GTGTTGTGCA GCAAGCATTG TCAGCCGAAA TAGAAGCAAT ATACGAATCA
AATACCGTAG ATGCTATTGA AAAAGGTGTG TTGGGTGTGC CGACCTATGT GTATCAAAAT
GAGCCATTTT GGGGACAAGA TAGACTCGAT TTACTTAACG ATAAGCTGGC TGGATAA
|
|---|
| Protein sequence | MTTAIDYYFT SLSPYAYLGH NTFTSLAEQH KTAINYKPIK LPKLFAVLGV LPVKQRLQAR
QDYRLIELAR WSTKRKLTLN LQPAFFPADP GLADRCTIVL QQAGQAVSEF VANVLAACWA
KDQNIADEAV IRQILTSLNL DADGVVQQAL SAEIEAIYES NTVDAIEKGV LGVPTYVYQN
EPFWGQDRLD LLNDKLAG
|
|---|
| |