Gene Sfri_3619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3619 
Symbol 
ID4280512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4296854 
End bp4297303 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content42% 
IMG OID638136432 
Producthypothetical protein 
Protein accessionYP_752285 
Protein GI114564771 
COG category[S] Function unknown 
COG ID[COG4446] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAAGC AAGTTTCAAT TATTACACTC AGCATGATGC TGTTAATGGG TTGTTCTGGC 
ACTGTGCCTA CTTTAGGCAT TAATGATGGC CAGTTAATGC CATGTCCTGA ATCACCAAAT
TGCGTCAATA GCCAACAATC AATTGCAGAT GAAGAACATG CTATACAACC GATTGAGTTC
GTCGGCACAC GCCAGCAGGC ACAGGCAAAA CTGTTGCACG TACTAAAAGC TGCTGAGCGA
GCGAATATCG TCGTGGTTGA GGATGATTAT ATCCGAGTAG AATTTACCTC GCAGATAATG
CGTTTTGTCG ATGATGTTGA GTTTTACTTT CCGTCAACAA CATCTAATAA CATTACTATC
CATGTTAGAT CTGCTTCACG TATCGGAAAG TCTGACTTTG GGGTTAACCG CGAGCGAATA
GAACAGATTA GAAATAACGT CAAACTATAG
 
Protein sequence
MYKQVSIITL SMMLLMGCSG TVPTLGINDG QLMPCPESPN CVNSQQSIAD EEHAIQPIEF 
VGTRQQAQAK LLHVLKAAER ANIVVVEDDY IRVEFTSQIM RFVDDVEFYF PSTTSNNITI
HVRSASRIGK SDFGVNRERI EQIRNNVKL