| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3602 |
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| Symbol | |
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| ID | 4280495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4274972 |
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| End bp | 4276444 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136414 |
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| Product | RNA-metabolising metallo-beta-lactamase |
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| Protein accession | YP_752268 |
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| Protein GI | 114564754 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000350398 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATGA CTTTACAGTT TCACGGCGCA ACTCAAGAGG TCACTGGATC TTGCCATTTA
CTCACCGTCA AAGGGCAGCA AGTGCTACTT GATTGTGGAT TAATTCAAGG GAGTAAAGCT
GACGCGTTAC GTAATCACGA TCCTTTTCCA TTCGATGCAA CACAAATCCA TGCCGTGGTA
TTAAGCCATG CACACATTGA TCATTCCGGC CGTCTGCCTT ATTTGATTAA TCAGGGGTTT
ACTGGACCTA TTTATACTCA AAAAGCCACC GCGCAGTTAT GCGATGTCAT GTTGCGTGAT
GCAGCCATGC TGCAAGAAAG AGATACCGAC AGGCAAAATA AAAAACGTGC AAAACATGAT
TTAGAACTGC TAGAACCGCT ATTTACCGAG AAAGATGTTG ATCAAGTGAT GGCGCAGTTT
GTGATGGTAG ATTATGGTCA ACGCGTACAG GTTGCCGATG CGGTAGAGGT TTGTTTATCA
GATGCAGGAC ATATTTTAGG TTCTGCTGTG GTTGAGTTGT GGTTAGGCAA TAAACCTGAA
CAGAAAAAAC TGGTTTTTAG TGGTGATTTA GGTCGTGCAG GCATGCCGGT TTTGGATGAT
CCAACGTTTA TTGAACAAGC TGATTTAGTG CTAATGGAAA GTACTTACGG TGATAGATTG
CACCGCAGTT GGGAAGATAC ATTGGTTGAA CTGAAATCAA TTTTTAAACG AACAACTCGT
GAAAGTAGAG GCAATATTTT GATCCCGGCA TTTTCTGTTG GCCGATCTCA AGAGCTGCTT
TATCTGTTCC ATCTATATGC CAAAGAGTGG GACTTATCGC GTTGGCGTAT TTGTTTAGAC
AGTCCAATGG CGATTAAAGC AACTGAGGTA TATGTTAATA ATTATCCGTT GATGGACGAT
GACTTTAAGC GTTTTACCCG CATGTCACCA GGCAACCATC CGTTGTTATC TAGTGCTGAA
TTTGTGTGTA GCACCGAAGA GTCGATAGAG CTGAACGATA TTCATGAAGG GTTAATCATT
ATTGCAGGTA GTGGTATGTG TAATGGTGGC CGAATTCGTA ATCATTTTGT GCATAATCTA
TGGCGTAAAG AAGCCGATAT TATTATTTGT GGTTTTCAGG CAATGGGAAC GCCAGGGCGA
ATACTAGTCG ACGGCGCTGA AGAGCTGACG ATTCATGGCC AAAGTATTAA AGTGGCTGCC
AGTATCCATA CTGTCGGTGG GTTATCAGCC CATGCCGACC AAGCCGAGTT ATTGTCTTGG
TATCGCCATT TTGAGCATTC TCCCGCAGTG ATATTGGTAC ATGGTGAACT AGAAGCACAG
CAAGTATTGA TTGAAGCGCT TAATCAAGAC AGTGACAATA AACCGAAAAA TAGTGCGATT
GCCCAACGAG GAGATTGCCT AGACTTAAAC GCGTTACCTG AGTTTGTGTG GCTGAATACG
GCGAGTGGGT CTAATGAGCC ATCAGAAACT TAA
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| Protein sequence | MDMTLQFHGA TQEVTGSCHL LTVKGQQVLL DCGLIQGSKA DALRNHDPFP FDATQIHAVV
LSHAHIDHSG RLPYLINQGF TGPIYTQKAT AQLCDVMLRD AAMLQERDTD RQNKKRAKHD
LELLEPLFTE KDVDQVMAQF VMVDYGQRVQ VADAVEVCLS DAGHILGSAV VELWLGNKPE
QKKLVFSGDL GRAGMPVLDD PTFIEQADLV LMESTYGDRL HRSWEDTLVE LKSIFKRTTR
ESRGNILIPA FSVGRSQELL YLFHLYAKEW DLSRWRICLD SPMAIKATEV YVNNYPLMDD
DFKRFTRMSP GNHPLLSSAE FVCSTEESIE LNDIHEGLII IAGSGMCNGG RIRNHFVHNL
WRKEADIIIC GFQAMGTPGR ILVDGAEELT IHGQSIKVAA SIHTVGGLSA HADQAELLSW
YRHFEHSPAV ILVHGELEAQ QVLIEALNQD SDNKPKNSAI AQRGDCLDLN ALPEFVWLNT
ASGSNEPSET
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