| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3598 |
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| Symbol | |
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| ID | 4280491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4271900 |
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| End bp | 4272910 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638136410 |
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| Product | luciferase family protein |
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| Protein accession | YP_752264 |
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| Protein GI | 114564750 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000425972 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATAT TGGCAGATAT TCCTTTTTCA TTACTCGAAC TCGCGCCGAT GCGCGAAGAC
GCCAGCGTCG CTGAAACATT ACACGGTAGC CTACGTTATG CTCAACATGC CGAAAATGTT
GGTATTAATC GTTTTTGGTT GGCTGAACAT CACAATATGC CAGGCATTAT TTGTTCGGCA
ACCTCGATAT TAATTGGCTA TATAGCAGGT GGGACTCAAC GTATTCGTGT TGGTGCTGGC
GGGATCATGT TACCTAACCA CGCACCCTTA GTGGTTGCAG AGCAGTTTGG CACCTTGGCC
AGTTTGTATC CCAACCGTAT AGATTTAGGC TTAGGCCGCG CACCCGGTAG CGACCAAGTG
ACGAGTCGTG CATTGAATCG TGATGATAGC CGAGCTGAAC ACTTCCCAGA AGAAGTGAGC
GAACTACAGT CATTATTAGG TCCGCGATCG CAGCGTCAAC AAGCTGCATC CGCCCAAGTG
AGAGCGATTC CGGGCGAAGA CACTAATGTG CCAATTTGGT TATTAGGCTC AAGTTTGTTT
AGCGCTCAGT TGGCTGCTAA ACGTGGATTG CCGTATGTAT TTGCAGGCCA CTTTGCACCG
CGTTTTTTAT ATGATGCAGT TGAGCTTTAT CGACGTGAAT TTATTCCTTC AGCTGTATTG
GGCAAGCCTT ATGTTATGTT GGGATTACCT CTGGTCGCCG CCCCAACAGA TGCTGAAGCA
GAGCACCTTA GTACTAGCTC GAAACAACGT ATTTTGGCGT TAATTCGCGG CAATGAAATG
TGGCTTAAAC CGCCTGTCGA TAGTATGGAT GGGTTGTGGA GCGAGCAAGA GAAAAGCTAC
GTTGATAACT TTTTAAGTTT GTCGGTGTGT GGCGGACCAG CAACGATGAA ACATCGACTT
GAAGTGATTG TTCAACAGCT AGGTGTTGAT GAGCTTATGT TTACCAATGA CTTATATGAC
AGTGAACATC GTTTACGCGC CTTGGATATT TTAATGAGCG TGAAACAATA G
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| Protein sequence | MSILADIPFS LLELAPMRED ASVAETLHGS LRYAQHAENV GINRFWLAEH HNMPGIICSA
TSILIGYIAG GTQRIRVGAG GIMLPNHAPL VVAEQFGTLA SLYPNRIDLG LGRAPGSDQV
TSRALNRDDS RAEHFPEEVS ELQSLLGPRS QRQQAASAQV RAIPGEDTNV PIWLLGSSLF
SAQLAAKRGL PYVFAGHFAP RFLYDAVELY RREFIPSAVL GKPYVMLGLP LVAAPTDAEA
EHLSTSSKQR ILALIRGNEM WLKPPVDSMD GLWSEQEKSY VDNFLSLSVC GGPATMKHRL
EVIVQQLGVD ELMFTNDLYD SEHRLRALDI LMSVKQ
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