Gene Sfri_3595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3595 
Symbol 
ID4280488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp4268147 
End bp4269154 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content44% 
IMG OID638136407 
Producthypothetical protein 
Protein accessionYP_752261 
Protein GI114564747 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.222828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATTC AAGCTGTTTT AGCCGATGCT TTAGCCAAGC GTGCCACTTT TTTTGAGCAA 
GCTGCCAAAG ATAATACTGA TTGTTATCGG GTTTTTCACG GTACCGTTGA AGGTGAAAAT
GGCCTTAACA TTGACCGTTA CGGCGATGCA TGGCTTATTC AAACATTTCA CCAAACCTTA
TCGGCTCAGC AACTTGAAGA CATATCAAGC CTACTGACTG CTCACGCGGA CTATCATATC
GTCTATAACG ATCGCTCAGG CAGCCATTCT CGTGTGGTCA ATCATGCCGA AAATGAAGCC
CAAGACTTCT CGCAATCAGA GCAAGTCATC CATGAAAATA GCATCGCTTT TACCTCCAAG
TTGCGCCATG AAGGTCAAGA TCCGCTGCTA TTTTTAGACA TGCGTATTGG GCGTGAATAT
GTACGCGCTA ACAGCCAAGG TAAGAGTGTT CTAAACTTGT TTTCATACAC TTGTGGTATT
GGTACTGCTG CAGCGATGGG CGGTGCTCGT AAAGTCATGA ATGTCGACTT TTCATCATTT
GCATTAGCTG CGGGACAAAA AAATGCTGAG CTAAACAATG TCACTGATGT GTGTGAATTT
GTTCAAAGTG ATGCGTTTCC GGCATTGCGT CAATTAGCGG GTTTGCCTAT TGGCGGTCGT
CGTAATCAAA AACTGCCTAA ATACCCTAAA CTGCGTGTGA CTCAGTTCGA CCTAGTGTTT
TTAGACCCGC CACGGTTTGC TAAAAGCGCC TTTGGTATTG TCGACTTAGT CAATGATTAC
CAAGGTTTAT TTAAACCAGC AGTATTAACC ACCAAAGTCG GCGGTAAAAT TGTCTGTTGT
AATAATGTCG CTAAAGTTGA TCGCCAAGCA TGGTACGACA GCCTAGTCCG TTGCGTAGAA
AAGCAAGGCC GTAAAGTCAC TGCGACTCAG TGGTTAGATT GCCACCTAGA CTTCCCCGCA
TTTGATGACA ATCATCCGTT AAAAATTGTC GTGCTAACAA TAGACTAA
 
Protein sequence
MSIQAVLADA LAKRATFFEQ AAKDNTDCYR VFHGTVEGEN GLNIDRYGDA WLIQTFHQTL 
SAQQLEDISS LLTAHADYHI VYNDRSGSHS RVVNHAENEA QDFSQSEQVI HENSIAFTSK
LRHEGQDPLL FLDMRIGREY VRANSQGKSV LNLFSYTCGI GTAAAMGGAR KVMNVDFSSF
ALAAGQKNAE LNNVTDVCEF VQSDAFPALR QLAGLPIGGR RNQKLPKYPK LRVTQFDLVF
LDPPRFAKSA FGIVDLVNDY QGLFKPAVLT TKVGGKIVCC NNVAKVDRQA WYDSLVRCVE
KQGRKVTATQ WLDCHLDFPA FDDNHPLKIV VLTID