Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3595 |
Symbol | |
ID | 4280488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4268147 |
End bp | 4269154 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638136407 |
Product | hypothetical protein |
Protein accession | YP_752261 |
Protein GI | 114564747 |
COG category | [R] General function prediction only |
COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.222828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATTC AAGCTGTTTT AGCCGATGCT TTAGCCAAGC GTGCCACTTT TTTTGAGCAA GCTGCCAAAG ATAATACTGA TTGTTATCGG GTTTTTCACG GTACCGTTGA AGGTGAAAAT GGCCTTAACA TTGACCGTTA CGGCGATGCA TGGCTTATTC AAACATTTCA CCAAACCTTA TCGGCTCAGC AACTTGAAGA CATATCAAGC CTACTGACTG CTCACGCGGA CTATCATATC GTCTATAACG ATCGCTCAGG CAGCCATTCT CGTGTGGTCA ATCATGCCGA AAATGAAGCC CAAGACTTCT CGCAATCAGA GCAAGTCATC CATGAAAATA GCATCGCTTT TACCTCCAAG TTGCGCCATG AAGGTCAAGA TCCGCTGCTA TTTTTAGACA TGCGTATTGG GCGTGAATAT GTACGCGCTA ACAGCCAAGG TAAGAGTGTT CTAAACTTGT TTTCATACAC TTGTGGTATT GGTACTGCTG CAGCGATGGG CGGTGCTCGT AAAGTCATGA ATGTCGACTT TTCATCATTT GCATTAGCTG CGGGACAAAA AAATGCTGAG CTAAACAATG TCACTGATGT GTGTGAATTT GTTCAAAGTG ATGCGTTTCC GGCATTGCGT CAATTAGCGG GTTTGCCTAT TGGCGGTCGT CGTAATCAAA AACTGCCTAA ATACCCTAAA CTGCGTGTGA CTCAGTTCGA CCTAGTGTTT TTAGACCCGC CACGGTTTGC TAAAAGCGCC TTTGGTATTG TCGACTTAGT CAATGATTAC CAAGGTTTAT TTAAACCAGC AGTATTAACC ACCAAAGTCG GCGGTAAAAT TGTCTGTTGT AATAATGTCG CTAAAGTTGA TCGCCAAGCA TGGTACGACA GCCTAGTCCG TTGCGTAGAA AAGCAAGGCC GTAAAGTCAC TGCGACTCAG TGGTTAGATT GCCACCTAGA CTTCCCCGCA TTTGATGACA ATCATCCGTT AAAAATTGTC GTGCTAACAA TAGACTAA
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Protein sequence | MSIQAVLADA LAKRATFFEQ AAKDNTDCYR VFHGTVEGEN GLNIDRYGDA WLIQTFHQTL SAQQLEDISS LLTAHADYHI VYNDRSGSHS RVVNHAENEA QDFSQSEQVI HENSIAFTSK LRHEGQDPLL FLDMRIGREY VRANSQGKSV LNLFSYTCGI GTAAAMGGAR KVMNVDFSSF ALAAGQKNAE LNNVTDVCEF VQSDAFPALR QLAGLPIGGR RNQKLPKYPK LRVTQFDLVF LDPPRFAKSA FGIVDLVNDY QGLFKPAVLT TKVGGKIVCC NNVAKVDRQA WYDSLVRCVE KQGRKVTATQ WLDCHLDFPA FDDNHPLKIV VLTID
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