Gene Sfri_3593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_3593 
Symbol 
ID4280486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp4267191 
End bp4267637 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content44% 
IMG OID638136405 
Product3-dehydroquinate dehydratase 
Protein accessionYP_752259 
Protein GI114564745 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAA CAGCAAAAGT TTTATTGATC AACGGTCCTA ATCTCAATCT ATTAGGCCGT 
CGCGAACCCG GACATTATGG TCACCAAACA CTCACCACTA TTGTGGATGA ATTAACTCGC 
AATGCGACTC AGGCTGGCGT TACGCTTGAA CATATTCAGT CCAATGCCGA GTATCAATTG 
ATTGATGCAA TTCATGCTAC CGACGCTCAA TTTATTATTA TCAATCCAGC AGCCTTTACG 
CACACCAGTG TTGCTTTGCG TGATGCCATA CTTGGGGTAG CGATTCCGTT TATTGAAGTA 
CATTTATCTA ACGTACATGC CCGCGAACCT TTTAGGCACC ATTCGTACTT TTCAGATAAA 
GCCCTAGGAG TAATTTGTGG CTTAGGCGCA CAAGGTTATG ATTTTGCTCT GCAAGCGGCG 
ATTAAGCACT TGAGCGATAA ACACTAA
 
Protein sequence
MSQTAKVLLI NGPNLNLLGR REPGHYGHQT LTTIVDELTR NATQAGVTLE HIQSNAEYQL 
IDAIHATDAQ FIIINPAAFT HTSVALRDAI LGVAIPFIEV HLSNVHAREP FRHHSYFSDK 
ALGVICGLGA QGYDFALQAA IKHLSDKH