| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3581 |
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| Symbol | |
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| ID | 4280474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4253596 |
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| End bp | 4256430 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638136393 |
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| Product | putative lipoprotein |
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| Protein accession | YP_752247 |
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| Protein GI | 114564733 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTGA AAAACATTTT TAAACTTACT GCACTTTCTA CAGCCCTTGC TGCAACATTA
GGGCTCGCTG GTTGTGGTGG TGATATTAAT ATCAATGCGG GTAGCGATAC TGTTACACCG
ACTACGCCAA CAACTCCAAC TACACCCACT CAGACAGAAC AACAAAAATC ATACAGTGGC
TTTGCAACTA AAAGCACCAC CATGACAGCC GTTGATGGTA AAGAAGTTTG GGTATTAAAG
GGAACTCTTG CACCTTCTAC AGCAGCATCA ACAATTACCA CTGGTGGCCA AGATGGCGAC
AAAATCGTAT TAGGTAATGA CGTTGTATGG CAGCTTGATG GTGCAGTGAT TGCCGGTGGC
GACAATGCCA ATGCGGTTGA GTTATCGATA TTACCTGGCA CCAAAATCTT AGGTGGCAGC
GATTCATATT TAGTGGTTAG CCGTGGTTCT AAAATTATGG CTGATGGTAC TGCAACTGCC
CCTATCGTAT TTACGTCTGT TGAAACGGCT TTAGGCCAAG AAGGTAAAGC GGGTCAGTGG
GGTGGTTTAG TGTTATTGGG TAATGCGCCA GTAAACACCT GCCCAGATTT AACTAATTGT
TCAGCGTCTT TTGAAGTGGG TAACCACAGC TACGGTGGTA ATGACACCGA AGACAATTCA
GGTTCAATCA AGTATGTACG TGTTGAGTTT GGTGGTTTCA AAATCAATGA CACCCAAGAA
ATGAACGGTA TTAGTTTTGC CGGTGTGGGT GCGGGTACTG AAATTGACCA CGTACAAGTT
CACATGAATA ACGATGACGG TTTTGAATTC TGGGGTGGTA ATGTTTCAGT AACAAATATC
GTACTGACAG AAAACTTTGA TGACTCGTTA GATTGGACTA ACGGTTGGCA AGGTAGTGCG
CAGCACGTTT ATATTCGTCA AGCTGATAAC GCATCTAACC GTGGTATTGA AGCCGACAGT
AACAGTGACG CAAGTGCTGT ACCTATGTCC AAACCAGTGT TAGCCAACTT TACTATTCAG
GTTGCTAACG GCACCAACAG TGGTGGTGAC GATGCGGAAG GTATTTTATT CCGTAAAGGC
ACTGGCGTGA ATACCTATAA CATTCTTGTT AAAGGTGACG TTGATTCTGG CGAATGTTTA
GAGGTTAACG ACGACAATAC CGTTAACAAC GCCAACACGG CAGAATTGAC GATGCAAAAC
AGCTTAATTG ACTGTGTTGA ACCGTTCAAA AATGCCAAGG CAGATGCTGC AGAAGGCCGT
ACTTTAGCGC TAGATGTTGA AGCTTGGTAC AAAGGGCAAG CGGATAACCT AGTTGCAGCA
GCAGATTTAA CCGATTACAT GCCTAATTCA TCATCTGTTG CATTAACGGC TGGCAAAGCA
GATTTGGCTA ACCTTGATGC GCGTTTGGTT AATGCTAACT ACATTGGTGC ATTTGATGGC
ACTAACGATT GGACGGAAGG CTGGACCACA GCCATTCATG ACGATGTAAC GCCAACACCG
ACAGCATTAC CAGTATTAAC CTCTTGTCCA GTAGGCACAA CAGCTTCAGC TGCAACAGCA
GGTTTATATA AAGATGCATC AATTACCTTA ATTTGTACCC TTGAAGGTAA TGTTTTAAGC
AACACGACTC TTCTCGCTGG CCAAAACGTA ATGTACAAAA TTGATGGCGG TGCAGTCGTC
GTGGGTGGAG ATAACACCAC GCCTGCAACA TTGGCTATTC AAGCGGGCAC TAAGTTATTC
GCGACATCTA ACAGCTTTAT CGCGGTGAGT CGTGGCTCAA AAATTATGGC TCAAGGTAGT
GCAACTCACC CAATTGAAAT GACCTCTGAA GAGGATGTGA TTGCGGGTGC AAGTGGCGAA
CGTGGTCAAT GGGGGGGATT GGTTATTCTA GGTAATGGTT TAACTAATAC ATGTCCTGAT
CATAATGCTT GTTCAGCGTC GTTTGAAGTC GGTGACTTCC CGTACGGTGG TAACAACAAC
GCTGATAACA GCGGTCAAAT CAGCTACGTA GTGATTAAGT ATGCTGGCTT TAAAGTGAAT
GATACTCAAG AAATGAACGG TATCTCATTT GCGGCTGTGG GCAGCGGAAC TCAAGTCGAC
CATATTCAAA TTCACGCTAA CGGCGACGAC GGTGTTGAGT TTTGGGGTGG TGCAGTTAAC
TTGAAATATG TGTACTTAAC TGAAAACTTC GATGACAGCT TAGATTGGAC TAACGGTTGG
ACAGGTAAAG CACAGTTTGT GTATATCACT CACGAAGACG GTAATGCTAA CCGTGGTATC
GAAGGTGATA GCCATAAAGG TGCTACTGAT ACCCCAGTGT CGGCGCCAAA ATTAGCTAAC
TTCACTATTT TACCGGGTAC AGATATTGCT AACGCAAGTG GCGATAAAGG TGAAGGTATC
TTGTTACGTG TTGCTACTGC TGGTGAGTTA TACAACGTGT TAGTTCAAGG TCGTAAAGGC
AGCACTGCTG ATACTGAGTC TGGCGAATGT TTAGAGTTAG ATGGCTCTTA CGCTGGTTTA
GTCGACAACG TAAACAGCAA AACGCTAACC ATGTCTCATT CAATTATCGA CTGTAACGAG
CCCTTTAAGT ACAGCTCTGA TAATGCCGCA ACAGCAGACG CTGTGAATGT TGAAACCTGG
TTCATGGGCC AAGAAGGAAA CTCAACAGCT GCAGTGACTA TCACTGACGG TATGCCAGCA
GCAACAGATA CAACGCTACT TGGCAAAGGT AAAGACTTAA GCACTGATGA TAGCTTTTTC
GAATCAACCA ACTTTATTGG TGCATTCGAT GGCCAGAATG ACTGGCGTCA AGGTTGGGCT
TACTTTCCAC AGTAA
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| Protein sequence | MELKNIFKLT ALSTALAATL GLAGCGGDIN INAGSDTVTP TTPTTPTTPT QTEQQKSYSG
FATKSTTMTA VDGKEVWVLK GTLAPSTAAS TITTGGQDGD KIVLGNDVVW QLDGAVIAGG
DNANAVELSI LPGTKILGGS DSYLVVSRGS KIMADGTATA PIVFTSVETA LGQEGKAGQW
GGLVLLGNAP VNTCPDLTNC SASFEVGNHS YGGNDTEDNS GSIKYVRVEF GGFKINDTQE
MNGISFAGVG AGTEIDHVQV HMNNDDGFEF WGGNVSVTNI VLTENFDDSL DWTNGWQGSA
QHVYIRQADN ASNRGIEADS NSDASAVPMS KPVLANFTIQ VANGTNSGGD DAEGILFRKG
TGVNTYNILV KGDVDSGECL EVNDDNTVNN ANTAELTMQN SLIDCVEPFK NAKADAAEGR
TLALDVEAWY KGQADNLVAA ADLTDYMPNS SSVALTAGKA DLANLDARLV NANYIGAFDG
TNDWTEGWTT AIHDDVTPTP TALPVLTSCP VGTTASAATA GLYKDASITL ICTLEGNVLS
NTTLLAGQNV MYKIDGGAVV VGGDNTTPAT LAIQAGTKLF ATSNSFIAVS RGSKIMAQGS
ATHPIEMTSE EDVIAGASGE RGQWGGLVIL GNGLTNTCPD HNACSASFEV GDFPYGGNNN
ADNSGQISYV VIKYAGFKVN DTQEMNGISF AAVGSGTQVD HIQIHANGDD GVEFWGGAVN
LKYVYLTENF DDSLDWTNGW TGKAQFVYIT HEDGNANRGI EGDSHKGATD TPVSAPKLAN
FTILPGTDIA NASGDKGEGI LLRVATAGEL YNVLVQGRKG STADTESGEC LELDGSYAGL
VDNVNSKTLT MSHSIIDCNE PFKYSSDNAA TADAVNVETW FMGQEGNSTA AVTITDGMPA
ATDTTLLGKG KDLSTDDSFF ESTNFIGAFD GQNDWRQGWA YFPQ
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