| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3556 |
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| Symbol | |
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| ID | 4280449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4225448 |
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| End bp | 4226842 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136368 |
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| Product | cytochrome c, putative |
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| Protein accession | YP_752222 |
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| Protein GI | 114564708 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.205085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAT TATCAGCACT GGCTGTATTA CTGTTATTAA GCAGTAGCGC ACAGGCTGCC
TTTAACCACA AAGAGGCGCT GAAAGGGCCT TTTGCTAATG GCCCTGAAGT GACGACACAA
TGCTTAACCT GCCATAAAGA ACATGCTGAA GAGTTTATGA AATCTTCACA TTGGACTTGG
GAGTTAGAGC AAAAACTACC AGACCGCACT GTGATGCGCG GTAAAAAGAA CAGCATTAAC
AACTTTTGTG TATCGATATC GGGTAACGAA CCGCGTTGTA CCAGTTGTCA TGCCGGTTAT
GGATGGAAAG ATTCAACATT CGACTTTAAA GACATGACCA AAGTCGATTG CTTAGTTTGT
CACGACACCA CGGGAACTTA CATTAAAGAT CCTGCGGGCG CAGGCGAGGC CTTAGCAAGA
GTCAATTTAG CCAATGTTGC CCAAAATGTA GGTGCACCCG TGCGTGACAA TTGCGGCAGT
TGCCACTTTT ACGGTGGCGG CGGTGATGCG GTTAAACACG GCGATTTAGA CTCATCAATG
TCTTATCCAG ACAAAGCGAC CGATGTCCAC ATGGATACCG ATGGAAATGA CTTCCAGTGT
CAAACTTGTC ACGTTACTGA AAATCATCAA ATTACCGGTA ACTCGATGGG CGTATCACCT
GGAGGGGAAA ACAAAATTGG TTGTGTAAAT TGCCATGATG CTGCGCCTCA TAAAAATAAA
AAGCTCAATA CACACACAGC AACTGTAGCG TGTCAGACTT GTCACATACC ATCATTTGCT
AAAAATGAAC CCACCAAAAT GCATTGGGAT TGGTCACAGG CAGGACAAGA TCTTCCTGAA
ACAACAGACC AATACGGCAA GCACACCTTT ATGAAAAAGA AAGGCAGCTT TATTTGGCAA
AAAGACGTTA AACCACAATA TGCCTGGTTT AATGGCCGCG CCGATGCGTA TATGGCTGGC
GATAAAATGG ACCCAACTAA AACGGTTAAA TTGGCTTATC CATTAGGTGA TATTCGCGAC
CCTAAAGCTA AAATCTACCC ATTTAAAGTG CACACGGGTA AGCAAATCTA TGATGCTAAA
CTTAATATTC TGATAACCCC TAAAACGTAC GGTGAAGGTG GCTACTGGGA TAAATTTGAT
TGGGACTTAG CTGCTAAATT AGGCATGGAA GCTAACCCAA CCATGGTAGA AAAAGGACTC
AAATACAGTG GTCAGCATGG TTTTGTTGAA ACCGAGATGT GGTGGCGCAT CAACCACATG
GTGTCACCAA AAGACAAGGC ACTACAGTGT AATGACTGCC ACAATAAAGG CGAGCGTTTA
GACTGGAAAG CCCTTGGTTA TGATGGCGAC CCAATGAAAA ATCGTAAAGG TATTAAACAC
ACAAAAGCTG ACTAA
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| Protein sequence | MKLLSALAVL LLLSSSAQAA FNHKEALKGP FANGPEVTTQ CLTCHKEHAE EFMKSSHWTW
ELEQKLPDRT VMRGKKNSIN NFCVSISGNE PRCTSCHAGY GWKDSTFDFK DMTKVDCLVC
HDTTGTYIKD PAGAGEALAR VNLANVAQNV GAPVRDNCGS CHFYGGGGDA VKHGDLDSSM
SYPDKATDVH MDTDGNDFQC QTCHVTENHQ ITGNSMGVSP GGENKIGCVN CHDAAPHKNK
KLNTHTATVA CQTCHIPSFA KNEPTKMHWD WSQAGQDLPE TTDQYGKHTF MKKKGSFIWQ
KDVKPQYAWF NGRADAYMAG DKMDPTKTVK LAYPLGDIRD PKAKIYPFKV HTGKQIYDAK
LNILITPKTY GEGGYWDKFD WDLAAKLGME ANPTMVEKGL KYSGQHGFVE TEMWWRINHM
VSPKDKALQC NDCHNKGERL DWKALGYDGD PMKNRKGIKH TKAD
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