| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3550 |
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| Symbol | metL |
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| ID | 4280443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4217805 |
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| End bp | 4220198 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136362 |
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| Product | bifunctional aspartate kinase II/homoserine dehydrogenase II |
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| Protein accession | YP_752216 |
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| Protein GI | 114564702 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGAA GTCATTTACA TAAGTTTGGT GGTTCAAGTT TAGCGGATGC AGATTGCTAT
CGCCGTGTTG CACATATTCT ACTTACGCAT GGTCAGAGTG ATGATTTAGT TGTGGTATCC
GCCGCCGGAA AAACGACTAA CTTCTTATAC AAATTATTGA GCCTGCGTGA CAGTGGTCAG
TTGTGGCAAG AAGAGCTGCA AATTCTGATC AGTTACCAGC AAACGTTAAT TGAACAATTA
TTGTCAAACG AGCAAGCGCG TGATTTACGC GAACGTTTGT CTACCGACAA ATCTCAGTTA
GTCAGCTTAT TATCTTTAGA GCAACGTAAC GATTACCAAT TAAACCAAGT GGTGAGTTTT
GGTGAACGTT GGTCGGCGCG CTTAATGGCC GCTTTGTTAC GAGAAATGGG CGTAGCTGCG
ACTCATGTCG ATGCGTGCTC TATTTTGGTT GCCGATGAAG GCGCCGTACC CAATATTTTA
GTCGCTGAGT CTCGTGACAA GGTACAAGCC TTATTAGCCT TGCACCCGCA AGAGCGTTTA
GTGATCACCG GTTTTATATG CGCAAATCGC CACGGCGATA CCTTATTACT GGGTCGCAAT
GGTTCTGATT TTAGTGCCAC CTTAATTGCC AGCTTAGCTG ACATTGATCG TGTAACCATT
TGGACCGATG TTGAAGGGGT GTTTAATGCC GACCCTAACA AAATTAATGA TGCGAAATTA
CTCAAGAGTA TGTCCTTAGC CGAAGCTGAC CGCTTAGCGC GCCTAGGCTC TCCTGTATTG
CATTCTCGTA CCTTACAGCC ACTGTTTAAT ACTGAAGTGA GTTTAGCGGT ACGCTCAAGT
TATGCTTCAC ACACTGACTT TACTTTAATC GCGCCACTGA GTTCATCAGC GAGTGCGCCT
GTGGTCACTA ACTTAAATGA AGTGGTGTTG TTTAGTTTTA AAATGAACGC AGATATTGAA
CCGTTACTGG CCATTTTGGA TAAAGCTGGT ATCACGCCGT TAGCTTATTG GTCGCTAGCA
CAGCATAAGT TTGAGTTGGC GTTAACGCTT GAAAGCCAAA AACAAGTGCA AGCTTTGCTT
AACCAATACA GCAGCGAATT TTTGATTGAA GAGTTGAGTG CCCAAACTGA CTTAGGCCTA
GTGGCATTAG TCAGTGCTGA TGCTCATCAC TTTAGACGCA GTTTTGCCCG ACTACTCAGT
CGTGATGCCA AACCGATTTA TCAAGATGCA TTAAGTTTGG TCACCTTAGT ACCGCAAGCT
CAAGTGAGTT TATTGACCCA AAAAGTACAT CGTCGTTGTG CTGGGCCAAG AATGCGTATT
GGAGTGTTAT TGCTGGGAGT GGGTAACATT GGTGAGGCGT GGATTGATTT GTTTAAACGC
GCCAGTCCAG TATTAGATCA CGAACTTGAA GCCTCTGTTG AGCTCGTTGG TTTAGTTGGT
TCGAAAAAAG CGTTAATTTC TAACGACGGA ATTAACCTTG AACAATGGCA GCAAGATTAT
CAACAGCAAG GTATTGAATG GGATTATGAT CAACTGTTTG ATCAATTAGC GCAGTTATCA
TGCGATGAAA TTGTCGCCTT AGATATTAGT GCTAGTGCCG CCTTAACCTT ACAATATCCA
GAGCTATTTG CCCGTGGTAT TCATGTGGTG AGTGCCAATA AATTAGCCGG TTCAGGGCCA
TTGCCATTTT ATCGCGAATT AAAGCAGCAG CTGAGTAATC GCCGCTTATT TTGGCGTTAT
AACGCCAGCT GTGGCGCTGG TTTGCCTATT CAACATGCGT TAAATGACTT ACGTAATAGT
GGTGACACTA TTGAAGCCGT GGGTGGGATT TTTTCGGGCA CGTTATGTTG GTTATTCGAA
AATTATGATG GCAGCAAGCC GTTCTCAGAA TTAGTACTTC ATGCTCGCAG TTTAGGCATT
ACTGAACCGG ATCCTCGTGA TGACTTATCT GGCCGCGATA TGCAACGTAA GTTGTTAATC
TTGGCTCGTG AGATTGGCTT AGCGGTAGAG CTAGAAGATA TTAGTCTCAA CTCGCTAGTG
CCTCAAGCCT TAGCTGAGTT ATCACTTGAA GACTTTTTAG CGCGCATTAG TGAGCTTGAT
GACGATTTGT TGCAGCAGTA TGTCGCTGCA GCTGAACAGA ACAAGGTGCT ACGTTATGTG
GCTTCGCTGG ATAAAGTCGA AGGTAAGTTA CAGGCTGAAG TGGGTTTGCA GTGGGTTGAT
AATAATCATC CTTATGCGAA TTTAACCCCA GGGGATAATG TGTTTGTTAT TCGTAGTGCG
TTTTATCAAG GTAATCCATT GATTATTCGC GGTCCAGGGG CTGGGCGAGA GGTGACTGCA
GCAGCGGTGC AGTCGGATTT AGTGCATATT TGCAAAGACC TGTTACAAGA GTAG
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| Protein sequence | MTRSHLHKFG GSSLADADCY RRVAHILLTH GQSDDLVVVS AAGKTTNFLY KLLSLRDSGQ
LWQEELQILI SYQQTLIEQL LSNEQARDLR ERLSTDKSQL VSLLSLEQRN DYQLNQVVSF
GERWSARLMA ALLREMGVAA THVDACSILV ADEGAVPNIL VAESRDKVQA LLALHPQERL
VITGFICANR HGDTLLLGRN GSDFSATLIA SLADIDRVTI WTDVEGVFNA DPNKINDAKL
LKSMSLAEAD RLARLGSPVL HSRTLQPLFN TEVSLAVRSS YASHTDFTLI APLSSSASAP
VVTNLNEVVL FSFKMNADIE PLLAILDKAG ITPLAYWSLA QHKFELALTL ESQKQVQALL
NQYSSEFLIE ELSAQTDLGL VALVSADAHH FRRSFARLLS RDAKPIYQDA LSLVTLVPQA
QVSLLTQKVH RRCAGPRMRI GVLLLGVGNI GEAWIDLFKR ASPVLDHELE ASVELVGLVG
SKKALISNDG INLEQWQQDY QQQGIEWDYD QLFDQLAQLS CDEIVALDIS ASAALTLQYP
ELFARGIHVV SANKLAGSGP LPFYRELKQQ LSNRRLFWRY NASCGAGLPI QHALNDLRNS
GDTIEAVGGI FSGTLCWLFE NYDGSKPFSE LVLHARSLGI TEPDPRDDLS GRDMQRKLLI
LAREIGLAVE LEDISLNSLV PQALAELSLE DFLARISELD DDLLQQYVAA AEQNKVLRYV
ASLDKVEGKL QAEVGLQWVD NNHPYANLTP GDNVFVIRSA FYQGNPLIIR GPGAGREVTA
AAVQSDLVHI CKDLLQE
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