| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3547 |
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| Symbol | metF |
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| ID | 4280440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4215382 |
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| End bp | 4216266 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638136359 |
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| Product | 5,10-methylenetetrahydrofolate reductase |
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| Protein accession | YP_752213 |
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| Protein GI | 114564699 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
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| TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTTTTC ATCATGCACA ACATGCCCAG TCGTTAAATC AGAGCTTGTC TGAGCTGAAT
GATATTAATG TGTCTTTTGA GTTTTTCCCG CCTTCAACGC CAGCAATGGA AGAGATTTTG
TGGAATTCTA TTCGTCGTTT AGAACCATTG AACCCTAAAT TTGTATCAGT AACATACGGT
GCCAATTCTG GTGTACGTGA CCGTACTCAT AGCGTGATTG AACGTATCCA GAAAGAAACC
AATCTGCTCG CTGCGCCGCA TTTAACCTTA GTTGATGCTA GTGATGAAGA ATTAGTTGAA
CTGGCAAAGC ATTATTGGAA TTCTGGTATT AGAGACATCG TGGCATTACG CGGTGATTTA
CCTGACGGTA GCCCAAAACC AACTCGCTTT GCCAATGATT TAGTGCGTTT ACTGCGCTCA
GTGGCCGACT TTGATATTTC GGTAGCGGCG TATCCTGAAG TGCATCCAGA TGCGCGTAAT
GCGCAGGCCG ATTTAATAAA CTTAAAGAAA AAGATTGATG CGGGTGCTAA CCGCGCCATT
ACTCAGTTTT TCTTTGATGT TGAATCCTAC TTACGTTTTC GCGACCGCTG TGTTACAGCT
GGTATAGATG TTGAGATCAT TCCAGGGATA TTACCTGTGA CTAACTTTAA ACAGACTAAG
CGTTTCGCTG GCATGACCAA TGTCGCTATT CCACATTGGT TACACCGCCA ATTTGAAGGT
TTAGATGACG ACCCAGCAAC ACGTCAGCTA GTGGGTGCCA ACGTTGCTAT TGATATGGTG
AAAGTATTGT CTCGTGAAGG TGTTAAAGAT TTCCATTTTT ATACCCTTAA TCGTGCTGAA
TTAACGTATG CCATTTGCCA TACATTAGGC GTGCGTCCGA AGTAG
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| Protein sequence | MAFHHAQHAQ SLNQSLSELN DINVSFEFFP PSTPAMEEIL WNSIRRLEPL NPKFVSVTYG
ANSGVRDRTH SVIERIQKET NLLAAPHLTL VDASDEELVE LAKHYWNSGI RDIVALRGDL
PDGSPKPTRF ANDLVRLLRS VADFDISVAA YPEVHPDARN AQADLINLKK KIDAGANRAI
TQFFFDVESY LRFRDRCVTA GIDVEIIPGI LPVTNFKQTK RFAGMTNVAI PHWLHRQFEG
LDDDPATRQL VGANVAIDMV KVLSREGVKD FHFYTLNRAE LTYAICHTLG VRPK
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