| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3541 |
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| Symbol | |
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| ID | 4280434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 4210259 |
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| End bp | 4211632 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638136353 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_752207 |
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| Protein GI | 114564693 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGCAG TCACGCAATT TGTCAGTATG ATTAACAGTA TAGTATGGGG CGTTCCCATG
CTTATTTTGA TTTTAGGGGT CGGGCTGTTT TTGTCGATAG GTTTAAAATT CATGCCTATT
TTAAAGCTGA ATCGAGGTTT TAAATTATTA TGGTCGGGTC GTCAGGTTAC TGATGAAAGT
GAAAAAGGTG ATGTCAGTCC ATTTAATGCC CTCATGACTT CATTATCGGC CACCATTGGT
ACGGGTAACA TTGCTGGTGT GGCTACGGCG ATTTTTATTG GTGGGCCAGG GGCATTATTT
TGGATGTGGT GTACGGCGCT CGTGGGTATG GCGACTAAGT TTTCGGAAGC CGTTCTGGCG
GTAAAATATC GTGAGACAGA TGCTAACGGT AACCATGTTG GCGGCCCGAT GTATTACATC
AAGAATGGTT TAGGCAGCAA ATGGGCCTGG TTAGGTACTG CATTTGCTCT GTTTGGCTCC
ATTGCCGGTT TTGGTATTGG TAACACCGTA CAAGCTAACT CAGTTGCTGA TGCGATGAGC
AGTAACTTTG GTGTACCTAG TTGGGTTACA GGTGTGGTGT TAATGGTGCT GGTGGGTGCG
GTACTCATGG GCGGTATTAA ACGTATTGCT GAAGTGGCTG GTAAGTTAGT GCCATTGATG
ACGGTATTTT ATATTACCGC TGGTTTAGCG GTATTGGTTG TATATGCAGA CGAAGTGCCT
GCTGCTTTTA TGTTGATTAT TGAAAGTGCC TTTAACCCAG TAGCGGCCCA AGGTGGTTTT
GCGGGGGCGG CGGTATGGGC TGCGATTCGT TTTGGTGTGG CACGTGGGGT ATTTTCAAAT
GAAGCCGGGT TAGGAAGTGC GCCAATTGCC CATGCGGCGG CGCAAACGAA TAACCCTGTG
AAGCAAGGTT TAGTGGCCAT GTTAGGTACG TTCATTGACA CGCTCATTGT ATGTTCAATA
ACGGGCTTGG CGATTGTGGT TTCTGGTGCG TGGACATCTG GCGAAAACGG CGCAGCATTA
ACCTCTCTAG CATTTTCACA TGCACTGCCC ATGGGTAACT ATATCGTGGC CATCGCTTTG
GCTGTGTTTG CTTTTACCAC TATTTTAGGG TGGAGTTTTT ACAGCGAAAA ATGTGTTCAA
TACTTATTAG GCGACAAAGC AGTTAAGCCA TTTCGTCTAA TCTGGACCTT GGTTGTGCCT
TTAGGTGCTG TAAGCTCATT AGAATTTATT TGGTTATTAG CCGACACATT GAACGCGATG
ATGGCGATTC CAAACTTAAT TGCGTTAGTG CTATTAAGCC CTGTGGTATT TGGCCTAACT
CGCGAATACT TTCTCAAGCA AAGAGCGCTT AACGCAAAAC AAAAAGCCAA TTAA
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| Protein sequence | MEAVTQFVSM INSIVWGVPM LILILGVGLF LSIGLKFMPI LKLNRGFKLL WSGRQVTDES
EKGDVSPFNA LMTSLSATIG TGNIAGVATA IFIGGPGALF WMWCTALVGM ATKFSEAVLA
VKYRETDANG NHVGGPMYYI KNGLGSKWAW LGTAFALFGS IAGFGIGNTV QANSVADAMS
SNFGVPSWVT GVVLMVLVGA VLMGGIKRIA EVAGKLVPLM TVFYITAGLA VLVVYADEVP
AAFMLIIESA FNPVAAQGGF AGAAVWAAIR FGVARGVFSN EAGLGSAPIA HAAAQTNNPV
KQGLVAMLGT FIDTLIVCSI TGLAIVVSGA WTSGENGAAL TSLAFSHALP MGNYIVAIAL
AVFAFTTILG WSFYSEKCVQ YLLGDKAVKP FRLIWTLVVP LGAVSSLEFI WLLADTLNAM
MAIPNLIALV LLSPVVFGLT REYFLKQRAL NAKQKAN
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