| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3510 |
|---|
| Symbol | |
|---|
| ID | 4280404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 4183298 |
|---|
| End bp | 4184104 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638136323 |
|---|
| Product | enoyl-CoA hydratase |
|---|
| Protein accession | YP_752177 |
|---|
| Protein GI | 114564663 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGAG AGTTAATTAA GTTAACAGTA GATAATGGCA TTGCCCATGT TTGCTTAAAT
AGACCCAGTA AAATTAATGC ACTTAATGTT GAAATGTTTA CTTCGATTGA TAATGTGATT
AAACAACTCC GTGGTGATAA ACGAATTAAT GCGGTTATTA TATCTGGCGC AGAAGGTAAC
TTTTGTTCTG GCTTAGATGT GAAGAGTGTC GCGAGTTCAC CCACAAGTGC ATTAAAGCTT
TTATTCAAGT GGTTGCCTGG CAATGCAAAT TTAGCCCAAC GTGTGTCTTT GGGATGGCAG
CGTTTGCCTG TTCCTGTCAT TGCGGTTCTA GAAGGTTGTT GCTATGGCGG TGGGATTCAA
ATTGCATTGG GTGCTGACAT TCGTATTGCT ACGCCAAGCT GTAAGTTGTC GATCATGGAA
GCAAAGTGGG GGCTTGTGCC AGATATGGCT GGTTTGGTGG CATTAAGACA AATTATGCCG
AAAGACAAAG CCTTGATGCT GACCTATACC GCGGATATTT TAACTGCCGA GCAAGCGCTT
GAGCTAGGTT TGGTAACTCA AATAAGTGAT AACGCTTATG AGTGTGCCAC GGCACTAGCC
CAAAAAATAA GCCGCACTTC CCCGGATGCT AATGCAGCCA TTAAACGCAG CATCAATCAA
AGTTGGACCG CCTCAGTGCG CAGCCTATTA GCCCGAGAAT CACTAAGCCA AATAAGATTG
TTGCTGGGTA AAAACCGCGT GATTGCAGCA ATTAGACAAA CTAAAAATCC TGATAAAGCC
TATCGTTCTC GTCAATCTTG GTGGTAA
|
|---|
| Protein sequence | MERELIKLTV DNGIAHVCLN RPSKINALNV EMFTSIDNVI KQLRGDKRIN AVIISGAEGN
FCSGLDVKSV ASSPTSALKL LFKWLPGNAN LAQRVSLGWQ RLPVPVIAVL EGCCYGGGIQ
IALGADIRIA TPSCKLSIME AKWGLVPDMA GLVALRQIMP KDKALMLTYT ADILTAEQAL
ELGLVTQISD NAYECATALA QKISRTSPDA NAAIKRSINQ SWTASVRSLL ARESLSQIRL
LLGKNRVIAA IRQTKNPDKA YRSRQSWW
|
|---|
| |